Sylvia atricapilla (blackcap): 136362906
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Entry
136362906 CDS
T10263
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136362906 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136362906 (PAPOLA)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136362906 (PAPOLA)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136362906 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RMD6
DUF4269
Motif
Other DBs
NCBI-GeneID:
136362906
NCBI-ProteinID:
XP_066177933
LinkDB
All DBs
Position
6:47370929..47414831
Genome browser
AA seq
754 aa
AA seq
DB search
MAGRGAVGECRKENGYANPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETL
KPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLG
VHTKGADIDALCVAPRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEI
DILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRA
IKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVL
LKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLA
ITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLE
KNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDT
VYRQAINSKMFEMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLS
MDSDNSTSVPSPTSAMKTSPLNSSGSSQGRSSPAPAVTAASVTNTQASEVTVPQINSSES
SGGTSNESIPQTATQPAISPPPKPTISRIVPSTYLLNPSPRSSGNVATKMPSPVAAVKRT
SSPHKEESPKKIKIEEQDEISEDTSCIDLNEHEKMETKEQIETEVNVNSQTETLQTTSLQ
APQKTPSTDLSDIPALPANPIPVIKNSIKLRLNR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagaggagcagtgggtgaatgcaggaaggaaaatggttatgccaatcccgtt
acaacccagggatcacaaacacagcaactacagaagcattatggcattacctcacctatc
agtttagctgcccccaaggagtttgactgcatgcttacccagaaattaatcgaaacccta
aaaccttatggtgtatttgaagaggaagaagagctgcaacgcaggattctaattttggga
aaattaaataacttggtaaaggaatggatacgagaaatcagtgaaagcaagaatcttccg
caatcagtaatagaaaacgttggaggaaaaatttttacgtttggatcttatagattaggg
gtccatacaaaaggtgctgatattgatgccctgtgtgttgcaccaagacatgttgaaaga
agtgattttttcacatcattttatgaaaagttaaaacaacaagaagaagtgaaagatcta
agggctgttgaagaagcttttgtcccagttattaaactttgttttgatggaatagagatt
gatattttgtttgcaagattagcgctgcaaactattcctgaggacttagatctacgagat
gacagcctacttaaaaatttagacattagatgcatacgaagtcttaatggttgccgggta
accgatgaaattctgcatctagtaccaaacattgacaacttcaggttaacactgagagct
atcaaattgtgggcaaaacgccacaacatctattccaatatactaggtttccttggcggt
gtttcctgggctatgctagtagcaagaacttgccagctttatccaaatgcaatagcatca
actcttgtacataaatttttcttggtattttctaaatgggaatggccaaatccagtgcta
ttgaaacagccagaagaatgcaatcttaatttgcctgtatgggacccaagggtaaacccc
agtgataggtaccatcttatgcctataattacaccagcatacccacagcagaactctacg
tacaatgtgtccgtttccacacggatggtcatggttgaggaatttaaacaaggtcttgct
atcacagatgaaattttgctgagtaaggcagagtggtccaaactttttgaagctccaaac
ttctttcagaagtacaagcattatattgtacttctagcaagtgcaccgacagaaaaacag
cgactagaatgggtgggcttggtggaatcaaaaatccgtattctagttggaaacctggag
aagaatgaattcattacactggctcatgtgaatccacagtcattcccagcacccaaggag
aatcctgacaaggaagaataccgtacaatgtgggtgattgggttggtgtttaagaaaact
gaaaactctgaaaatttaagtgttgatcttacctacgacattcagtcttttacagacaca
gtttataggcaagcaataaacagcaagatgtttgagatggatatgaagattgctgcgagg
catgtgaaacgtaagcaacttcaccaactgctacctaatcatgtgcttcagaaaaagaaa
aagcactcgacagaagggatcaggttgacagctctgaatgacagcagcctagacttgtct
atggacagtgataacagcacgtctgtgccttcgcctaccagtgctatgaagacaagtccg
ttgaacagttctggaagttctcagggcagaagcagtcctgcgccagctgtaacagcagca
tctgtgaccaacacacaggcttctgaagtcactgtgccacaaataaattccagtgaaagc
tcagggggtacttcaaatgaaagcattcctcaaactgccacacaaccagccatttctcca
ccaccaaagcctaccatctctagaattgttccctcaacgtatctattaaatccatcacca
agaagttcaggaaatgttgcaacaaaaatgcctagccctgtcgcagcagtgaaaaggaca
tcttctccccataaagaagagtctcctaagaaaattaaaattgaagagcaggatgaaata
agtgaagatactagctgtatagatttgaatgaacatgaaaaaatggaaactaaggagcag
attgagacagaagtgaatgttaattctcaaacagaaacacttcagacaacttctctgcaa
gctcctcagaaaacacccagtacagacctttcagatatccctgctcttcctgcaaatcct
attcctgttatcaagaattcaataaaattgagattgaaccggtaa
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