Sylvia atricapilla (blackcap): 136363019
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Entry
136363019 CDS
T10263
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136363019 (PNN)
Spliceosome [BR:
sati03041
]
Complex C
Other components
EJC/TREX
136363019 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136363019
NCBI-ProteinID:
XP_066178162
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Position
6:complement(57872778..57882118)
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AA seq
694 aa
AA seq
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MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTRTK
PHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKTGSGSGHSDAEKEQE
EEEQKHDTEMKVEESTEVRENDKQQDGQHEEVTVVKEESENVQPVDNDQDMAEMNEADSV
EPVENENGKEIEPETECDAQPEKLSNVPSPKKEKGIKTENKAELEETQEKTPEAQTESVA
EALSQAQSVPLAQSPQLSQSTQDTEPQADKDENAVVSVKVVEAQAEQNQTASAESKGKTR
SRSRGRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGGRDAKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtggacgagaatatccgcaagctcacggggcgggaccccaatgatgtgaggccccct
caaaacaggctgttagccctcacaggccccggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggaccttgaa
ggtgcatccagtaggctgggcggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatatcaaaaagccagcattgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcacccttcaaaaatttaaacaggagtcc
acggttgctattgctactgagaggcaaaagagacgacaagaaattgagcaaaaacttgaa
gtgcaggcagaggaagagcgaaaacaagttgaaaatgagaggcgagaactgtttgaggaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataatgctaaaataattaaatatataagaacaaggacaaaa
cctcatttattctacatacctggcagaatgtgtcctgctacgcagaagctgatggaagag
tcacagaaaaagatgaatgccctctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagaacatcaagaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaagaggtaggg
gaggaaaagggaaaaacaggttcaggttcagggcatagtgatgcagaaaaagaacaggaa
gaggaggagcagaaacatgacacggagatgaaagtagaagagtctactgaggtgagggag
aatgacaagcagcaggatggtcagcatgaggaggtcacagttgtaaaagaggaaagtgaa
aacgttcagccagtggataatgaccaggatatggctgaaatgaatgaggcagatagtgta
gaacctgtagaaaatgaaaatggcaaagaaatagaaccagaaacagagtgtgatgctcag
ccagaaaaattgtctaatgttccttctcccaagaaggagaaaggtatcaaaacagaaaat
aaagctgaacttgaagaaacacaggagaaaacacctgaagctcagacagaatctgtggct
gaggctctatctcaggcacagtctgtgccactagcacagtcacctcagttgtctcagtcc
actcaggatacagagccccaggcagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gttgaagcccaggcagagcagaatcagacagcgagtgcagaaagtaaaggtaagaccagg
agtagaagcaggggtagggcagggaacaaaactggtcataaccgtagcagcagcagtagt
agcagtagcacttcaagcagtactaccagtgcaagtagttccagtactggcagcagtacc
agtcggagcagttccaccagcagcagcactacaagtggcagtacgagcagggacagtagc
agcagtagctcgagcagtagtgaaagcagaagtcgaagccgaggcagagggcataacaga
gatagaaaacgcagaaggagcacagacaggaagcgaagggatgcttcgggagtagataga
agtcacaagtcctccaaaggtggtggtagggatgccaaaagctcaaaggataaaagttcg
agatctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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