Sylvia atricapilla (blackcap): 136363078
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Entry
136363078 CDS
T10263
Symbol
NOVA1
Name
(RefSeq) RNA-binding protein Nova-1
KO
K14944
RNA-binding protein Nova
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136363078 (NOVA1)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136363078 (NOVA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
136363078
NCBI-ProteinID:
XP_066178262
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All DBs
Position
6:62894704..63051516
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AA seq
507 aa
AA seq
DB search
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPN
STAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
IQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAAN
LLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGS
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAA
TQAAQYLITQRITYEQGVRAANPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacgggacccacaccggggttcccatagacctg
gacccgccggactcccgcaaaagaccgctggaagcgccccccgaagccggcagcaccaag
aggaccaacacgggcgaggatggccagtattttctaaaggtcctcatacctagttatgct
gctggatctataattgggaagggaggacagacaattgttcagttgcagaaagagactggg
gccaccatcaagctgtctaaatccaaagatttttatccaggtaccacagagcgggtgtgt
ctgatccaggggacagtggaagcactaaatgcagttcatggcttcattgcagagaagatc
cgagagatgcctcagaacgtggccaagacggagccagtcagcatcctgcagccccagacc
accgtcaacccagaccgcatcaaacaaacattgccatcttccccaactaccaccaagtcc
tctccatctgatcccatgaccacctccagagccaatcaggtaaagattatagttcccaac
agcacagcaggtctgataatagggaagggaggtgctacagtgaaggctataatggagcag
tcaggggcttgggtacagctttcccagaaacctgatgggatcaacttgcaagagagggtt
gtcactgtgagtggagaacctgaacaaaaccgaaaagctgttgaacttatcatccagaag
atacaagaggatccacagagtggcagctgtctcaatatcagttatgccaatgtcacaggt
ccagtggccaattccaatccaaccggatctccttatgcaaacactgctgaagtgttacca
actgctgcagctgctgcagggctcttaggacatgctaaccttgctggagtggcagccttt
ccagcagttttatctggctttacaggcaatgacctggtggccatcacctctgcacttaac
acgttagccagctacggatataatctcaatacattaggtctaggcctaagtcaggcagca
gctacaggggctttggctgcagcagctgccagtgccaacccagcagcagcagcagccaat
ttgttggccacctatgcgagtgaagcctcagccagtggcagcactgctggtggtacggcg
gggacatttgcattaggtagcctggctgctgctactgctgcaaccaatggatattttgga
gctgcttctcccctagctgccagtgccatcctaggaacagaaaaatccacagatggatca
aaggatgtagttgaaatagcagtgccagaaaacttagttggtgcaatacttggaaaagga
gggaaaacattagtggaataccaggagttgactggtgcaaggatacagatctctaaaaag
ggagaattcgttcctggcacaagaaatcgcaaggtaaccattactggaacaccagctgca
acccaggccgcacagtatttaatcacacaacggatcacatatgagcaaggagttcgggct
gccaacccacagaaagtgggttga
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