Sylvia atricapilla (blackcap): 136363318
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Entry
136363318 CDS
T10263
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
136363318 (BARD1)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
136363318 (BARD1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
136363318 (BARD1)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
136363318 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136363318
NCBI-ProteinID:
XP_066178535
LinkDB
All DBs
Position
7:complement(4288459..4329151)
Genome browser
AA seq
787 aa
AA seq
DB search
MREALRGRSGNQPAPASPLRPATPSMAPPGHPWSHTRAALGRLEKALSCSRCAGVLREPV
SLGQCEHVFCLSCVGDCVGAACPVCRVPAWVQDAQINRQLDNMIQLCSQLRQLLGASDPA
EDTSTPPDLGRKSKKEQIKMWFSPRSRKIRCVVNRSPAETKSHDLGQDTSSVYDFFPSPP
HPQEKPSKPTKRPTQRQIKKMKKKHLADINKEWSLEKPEQKRAEEKTPKEKCVTICSQPV
VLCTPEPESPEERPQQEPVKEADSSNNTEDAEVLPQAESSEKRENSEVVCSAQDSKGKNC
AAETLLSIANEVAPLKRGREQSRLQESTPQSKRARRSERGIPGKPGRQAEEESLQGSPIC
PATEQTPVRISPSASKLPDTGMKTRRSAALQAINSPSLSESPSTPSTSKTCSQIATPLSP
ALLKSPGGNTIARRNYKGETLLHVASIKGDLAAVEQLLKNGADPNVKDNAGWTPLHEACH
HGHRAVVELLLRHGALVNTAGYQNDSPLHDAARGGHVAVVELLLLHRACRDAVNRFGLRP
VDYAESEKMRSVLMLPVKNESFSLNQPSEALSSSQPRNGPLGILGSSLSEKQQKLLNKLA
TVLKAQRCTEFNSRVTHLVVPNVPMPSTVKCMMAVLTGCWVLRFEWVQACLQSSVREQEE
KYEVQGGPRRGRLNREQLLPKLFDGCYFYFLGPFKQHQKSDLLELVKAAGGQILVRQPKP
DSDVTQTINTVAYHADPTSDQRLCTQYVIYDVASKFRPEKIRQGKVWMAPSSWLIACVMS
FQLLPVK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcgggcgttcgggcaaccagccggccccggccagtcccctccgt
cccgccaccccctccatggcgccgcctgggcacccctggtcccacacccgcgccgcgctg
gggcggctggagaaggcgctgagctgctcccgctgcgctggcgtcttgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgtcctgcgtgggtgactgtgtcggcgcc
gcgtgccccgtgtgccgtgtgcccgcctgggtgcaggacgcgcagatcaaccggcagctg
gacaacatgatccagctctgcagccagctgcggcagctcctgggcgcctcagatccagca
gaggatacatccaccccgcctgacttgggaaggaagagcaagaaggagcagataaaaatg
tggttcagcccaaggagcaggaagattcgatgtgtggtgaacaggagtccggctgagaca
aaaagccatgaccttggtcaggacacatcttcagtttatgatttctttccttcccctcct
caccctcaggagaaaccctccaagccaacaaaaagaccaacccagagacagattaagaag
atgaagaagaaacatctagcagacattaacaaagagtggagcttagagaaacctgagcag
aaaagagccgaggagaagactcccaaggaaaagtgtgtgaccatctgcagtcaacccgtg
gtgctgtgcactccggaaccagagagtcctgaagaaagacctcagcaggagcctgtaaag
gaagctgactccagcaataatacagaagatgcggaagttctaccacaggcagaatcctca
gagaagagagagaacagtgaggttgtgtgctctgcacaagatagcaagggaaagaattgt
gctgcagagacattgctgtcaatagcaaatgaagttgctcctttgaaacgtggaagagag
caatccagacttcaggagtctacccctcagtctaaaagagcaaggagaagtgagaggggc
attcctggaaagccaggcaggcaggctgaggaggagtcactgcagggctcccccatctgc
ccagccactgaacagacaccagttcggatttctccctctgcatccaaactccctgacact
ggcatgaagacaagaagatctgcagcccttcaagccataaacagtccttcactttcagaa
tctccctctaccccatccacttctaagacttgcagtcaaatagcaacaccactcagtcct
gctctgttgaaatcccctggtggcaacacaattgccagaagaaattacaagggagagact
ttgctccatgttgcttccatcaagggtgacttggcagctgtggagcagctgctgaagaac
ggggcagatcccaatgtcaaagataacgcaggctggacaccactgcacgaggcgtgtcac
cacgggcacagggcggtggtggagctgctgctgcggcacggggcgctggtgaacacggca
ggataccagaacgactcccccctgcacgacgccgcccgcggcgggcacgtggccgtggtg
gagctgctgctgctgcacagagcctgccgggacgccgttaatagatttggtctgcggcct
gtggactatgcagagagcgaaaagatgagatctgtgctaatgttaccagtgaagaatgaa
tcattttcacttaaccagccctctgaggcactgagctccagccagccaagaaatggaccc
cttggtatactgggcagcagtctgagtgagaagcagcagaaactgctgaacaaattagca
acagtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcatcttgttgtc
cccaatgttccaatgccaagtactgtcaaatgcatgatggctgttctgactggatgttgg
gtcctcaggtttgaatgggtacaagcctgtctgcagagctcagttcgggaacaagaggag
aagtacgaagtccaaggtggcccgcggcgagggcggctcaaccgagagcagctgctgcct
aagttgtttgacggatgctacttctattttctggggcctttcaaacagcaccagaagagt
gatctgctggagctggtgaaagcagcaggtggccagatcctggtgaggcagcccaaacct
gacagtgacgtgacacagaccatcaacacagtggcctaccacgcagatcccacctctgac
cagaggctctgcactcaatacgtcatctatgacgtggcctccaagttccggccggagaaa
atccggcagggcaaggtgtggatggccccctccagctggctcattgcctgtgtgatgtca
tttcagctcctgcctgtgaagtga
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