Sylvia atricapilla (blackcap): 136363515
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Entry
136363515 CDS
T10263
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04145
Phagosome
sati04814
Motor proteins
sati05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136363515 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
136363515 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136363515 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136363515 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136363515 (DYNC1I2)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
136363515 (DYNC1I2)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
136363515 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
MAT1
Motif
Other DBs
NCBI-GeneID:
136363515
NCBI-ProteinID:
XP_066178930
LinkDB
All DBs
Position
7:complement(18335598..18360796)
Genome browser
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKDVLPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREIVTYTKETQTPVMTQPKEDEEEEDDVVAPKPLVEP
EEEKTLKKEEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQS
KAVAVTCMSFPIGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRGD
EWTRFGRTLAEINANRADAEEEAATRIPT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggcggagttggagcgcaagaaacaacgattagctcaa
attagagaggagaagaagagaaaggaggaagaaaggaagaagaaagaaactgaccagaag
aaagatgttcttccagtacaagaagaatctgatcttgaaaagaagagaagagaagctgaa
gcattacttcagagtatggggttgacacctgagtcacctgttgtccctcctcctacctct
ccgtcctccaaatccgtgagtacgccaagcgaggccgggagccaggactccggggatggt
gctgttggatccaggacgctgcattgggatactgatccatcagttcttcagctccactct
gattccgatctgggacgtggacctgttaaacttggaatggccaaaattacacaagttgac
tttcctcctcgagaaattgttacctacacaaaggagacgcaaacacctgttatgactcag
cccaaggaagatgaggaagaggaagatgatgtggttgcaccaaaaccattagttgaacct
gaggaagaaaaaacactaaaaaaggaggaagaggaagaagctgcccctcatgaactcaca
gaggaggaaaagcaacaaattttgcattctgaagaatttttaagtttttttgaccactcc
acaaggattgttgaaagagccctttctgagcaaatcaacattttctttgactacagtgga
agagacctagaggacaaagaaggagagattcaagcaggagcaaaactgtccttaaatagg
cagttttttgatgaacgttggtcaaagcatcgtgttgtcagttgtctggactggtcatct
cagtatccagaattacttgtagcctcttacaacaacaatgaggatgcgcctcatgagcct
gatggggtggcccttgtatggaatatgaagtacaagaaaactaccccagagtatgtcttt
cactgccagtctgcagtgatgtcagctacatttgcaaaatttcatcccaatctggtggtt
ggtggcacgtactcgggccagatagtgctgtgggataatcgcagcaataagagaacccca
gtgcagagaacgccactttcagctgctgctcacacgcacccagtgtactgcgtaaatgtt
gttgggacccagaatgctcataatttgattagtatctcaactgatgggaaaatatgctct
tggagtctggatatgctttcccaaccacaggatagcatggagctagttcacaagcaatcc
aaggctgtggccgttacctgcatgtctttccctattggagatgtcaacaactttgttgtt
ggcagtgaagaaggctcagtgtacactgcatgccgtcatggcagcaaagctggaatcagt
gagatgtttgaaggacaccagggaccaatcacaggtatcaactgccatgcagcagttggg
cctgtagacttctcacatctttttgtcacctcttcttttgactggacagtaaagctttgg
acaacgaagaataataaacctctttactcctttgaagacaactcggattatgtttatgat
gtgatgtggtctccaactcaccctgccttgtttgcctgtgtggatgggatgggcaggctt
gacctgtggaatctcaacaatgatactgaggtgcctactgcaagcatcaccgtggagggc
aatcccgctctgaaccgtgtgagatggacacattctgggagagagattgctgtaggcgat
tcagagggacaaatagttatatatgacgtgggagagcaaatcgccgtcccgcgcggggat
gagtggactcgctttggccggacgctggcggaaatcaacgccaacagagccgacgccgag
gaggaggctgcgacccgcatccccacatag
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