Sylvia atricapilla (blackcap): 136363649
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Entry
136363649 CDS
T10263
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136363649 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sati04812
]
136363649 (CLASP1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
136363649 (CLASP1)
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
136363649 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Sec7-like_HUS
RTP1_C1
Cnd1
Adaptin_N
HEAT_DAAF5
PDS5
ParcG
MMS19_C
MMS19_N
XRN_M
TPR_20
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
136363649
NCBI-ProteinID:
XP_066179156
LinkDB
All DBs
Position
7:complement(26978838..27150214)
Genome browser
AA seq
1532 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDIISALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMVQTSVDKI
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAALGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLGRIRTRRQSSGSATSVTSTPADT
RGRSRAKVVSQSQPGSRSSSPGKLLGSSYGGLSGGSSRVQAVPSSSEKRSKIPRSQGCSR
ETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLGQPGRMPASV
NAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSY
GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEI
FTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQK
ALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETR
LAVSRIITWTTEPKSSDVRKTMHSWVGEDLPARTSTASSGPGEGNLEEKCKQAAQIVLIS
LFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTS
PLTSPTNCSHGGLSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDG
KKDCDIVSRDGGLALPSGDVRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPY
PYTDTINTYDKTALKEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALL
ELLKITREDNLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAE
LTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQ
TKVIERISKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQL
TGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcttagcgcaggtgctgcagaaggacgttggaaaaaga
cttcaggttggccaggaattgatagattatttctcagataaacagaagtcagctgatctt
gaacatgatcagactatgctggataaaatggttgatggactggccacttcttgggtcaat
tccagcaattataaggtggttcttctggggattgacatcatctctgcactggtgtcccgc
ctgcaagatcgcttcaaggcccagattggcacagtgctgccaagtttacttgataggctg
ggagattctaaggactcagtgagggagcaggatcagaccttgctgctgaaaatcatggaa
caagctgctaaccctcagtatgtgtgggacaggatgctgggaggattcaaacacaagaat
tttcggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactaagtaagatcgtgccacatatatgtaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagccttgtggaaatttacagacacgttggtgaa
cgtgtaagggctgatctcagtaaaaaaggattaccccagtctcgcttgaatgtaattttt
acaaaattcgatgaggtccaaaaatctggaaacatggtccagacttcagttgataaaatt
tttgatgatgaagactccgtggatgggaacagaccttcctcagccagctcctctacatct
tcaaaggcccctgcaaactcacgcagagttgggatgggcactacccgcagacttggctct
gcagctctgggctccaagtcttcaacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacagttcagatttattccagccgggatctt
gaggaatccataaacaagatcagagagatactatcagatgataaacatgactgggaacag
agagtttctgcgttgaaaaagatccgctccttacttttggctggagctgcagaatatgat
aacttcttccaacacttaagacttctggatggagcatttaaattatctgctaaagacctg
cggtctcaagttgtacgagaggcttgtatcacattgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccatcatgccaacaatttttaatctaattccaaat
agtgccaaagtcatggccacttctggtgtagtagcagttagattaatcattcgacacacg
cacatccctcggttaatacccatcataaccagtaattgtacctccaagtctgttgcagtt
agaaggcgctgctttgagtttttagacttgctgttgcaggagtggcaaacgcactcctta
gaaagacacatatcagtgttagctgaaacaataaagaagggaattcatgatgcagactct
gaagccaggatagaggcaagaaagtgctactggggtttccacagtcacttcagccgagag
gcagagcacttgtaccacaccttggagtcttcctaccagaaggccctgcagtcacatttg
aagaactctgacagcatcgtgtccttgccacagtcggatcgctcctcctccagctcccag
gagagtctcaaccgtccactgtctgccaaaagaagtcctactggaagtacaacatcaaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgtcgatgtgaatgcagcagctagtgccaagtcaaaagtgacgtcttctggagcatcc
acccccttcagttctgctgcagccttgcccccagggtcatacgcatcactaggtcgaatt
cgcaccaggagacagagctctggcagtgccacaagtgtcacctcaacgcctgctgatact
cgaggccgcagccgcgctaaagtagtttcccaatcccaacctggtagccggtctagttct
ccgggtaagctcttaggaagctcctatggtggcctgagcggtggatcatccagagtccag
gcagtgccatcatcctcagagaagcgcagcaagattcctcggagccagggatgcagtcgg
gagacgagtcccaacagaataggcctagcacggagcagtcgtatcccccgacccagcatg
agtcaggggtgcagtcgtgataccagccgtgagagcagtcgagatacaagccctgctcgg
ggcttccctccacttgaccggtttggactcggacagccaggcaggatgcctgcttctgtg
aatgccatgcgagtcctgagcaccagcacagatctggaggctgccgtggccgatgcactg
ctgttaggagactccaggagcaagaaaaagccagtgagaagaagatacgagccctatggg
atgtactctgacgatgatgccaacagtgacgcatccagcgcttgctcggagcgctcctat
ggctccaggaacggcggcattccacactacctgcggcagaccgaggatgtggctgaggtg
ctgaaccactgcgccagctccaactggtctgagaggaaagaagggctcataggtcttcag
aatttactgaaaagccaacggacgctgagccgagtcgagttaaaaaggctgtgtgaaata
tttactcgcatgtttgctgacccacacagcaaggtcttcagcatgtttctggaaaccctg
gttgatttcatcatcattcataaagatgacttgcaggattggctttttgttctcctgact
cagttgctaaagaaaatgggagcagatttgttggggtctgtgcaagcaaaagttcaaaaa
gctctggatgtcaccagggattcttttccatttgatcagcaatttaacattttgatgagg
tttattgtagatcagacccagacaccaaacctgaaggtcaaagttgctatcctgaagtat
attgagtccttggcaagacaaatggatccaacagactttgtgaactccagtgagacaaga
cttgctgtatctagaattattacttggactacagaaccaaagagctcagatgtgagaaag
acgatgcatagttgggtgggtgaggatttgccagctaggacatctacagcctcctcaggg
cctggtgaaggaaacttggaagagaaatgtaaacaggcagcacaaatagtcctgatttct
ctctttgaattgaacactcctgagtttaccatgttacttggtgccttgccaaaaacattc
caggatggtgctaccaagctcctgcacaaccacctcaagaactccagtaacaccagtgtg
ggttcccccagcaatacccttggtcggactccttcccggcactccagcagcagaaccagc
cccttaacttcacctaccaactgttcccatggtggactgtctccaagtatgctggattat
gacacggagaacctaaactctgatgaaatctacagctctcttcgtggagtcacagaagca
attgagaaatttagtttccgtagtcaagaggacctgaatgagccaatcaaacgtgatgga
aagaaagactgtgacattgtgtctcgagatggtggccttgctctccctagtggtgatgtc
cgtggaagtagtgacattgtggaaggcgggaggatggctctggataacaaaacctccctc
ctgaacactcagcctccccgcgccttttcagggccccgtgctcgggagtacaacccctat
ccttacactgacaccattaacacctatgacaagactgccctgaaggaagcagtgttcgat
gacgacatggatcagcttcgggatgaagttcccattgaccattcggatttggtggctgac
cttctgaaagagctctccaaccacaacgagcgtgtggaggagcggaaaggagctctcctg
gaattgctaaagatcacaagggaagataatcttggagtttgggaggaacatttcaaaacc
attctgctcttgctgctggaaacgcttggagacaaagatcattcgatcagagccctggcg
ctgcgagtcctgagggagatcctgcggaaccagccagcgaggtttaagaattacgcagag
ttgactatcatgaaaacactggaagcacataaggattcccacaaggaggtcgtcagagct
gctgaagaagctgcttccaccctggcgagttccatccaccctgagcagtgcatcaaggtg
ctttgccccatcattcagactgcagattatccaattaacttagctgccatcaaaatgcaa
acgaaagtcatcgagaggatttccaaggaatctttgcatcaactcctacccgatatcatt
cctgggttgttacagggttatgataacacggagagcagtgtccgaaaagccagtgtattt
tgcctagtggctatttattcagtaattggagaagaactgaaacctcatctcgcacaactc
acaggaagcaagatgaagctactaaacttgtatataaagagggcacagaccaccaacagc
aacagcagctcctcttcagatgtttcaacgcacagttaa
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