Sylvia atricapilla (blackcap): 136363668
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Entry
136363668 CDS
T10263
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04145
Phagosome
sati04148
Efferocytosis
sati04510
Focal adhesion
sati04512
ECM-receptor interaction
sati04810
Regulation of actin cytoskeleton
sati04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136363668 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136363668 (ITGB5)
04148 Efferocytosis
136363668 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
136363668 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136363668 (ITGB5)
04810 Regulation of actin cytoskeleton
136363668 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136363668 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136363668 (ITGB5)
Membrane trafficking [BR:
sati04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
136363668 (ITGB5)
Cell adhesion molecules [BR:
sati04515
]
Integrins
Integrin beta subunits
136363668 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
136363668
NCBI-ProteinID:
XP_066179186
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All DBs
Position
7:complement(28949090..29007430)
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AA seq
811 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPLLLLRLLLLAAPLQPGRGLNLCTSGSATSCEECLLIHPKCAW
CSKEDFGSTKSITSRCDFLQNLVANGCAGAIESPSSSISVVQNVPLSSKGSGQTHLDVTQ
ITPQKVALNLRPGDRTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTDKVD
RFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKGHYMLYKNF
TTLIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDSPEDIGLTFTATCQDGLSYP
GLRKCGDLKIGDTVSFEVAVEARSCPAEDTSHTFTIKPAGFRDTLEVAVTYSCLCGCTGR
AAPASGKCSGNGTYTCGLCQCEPGYLGARCECEEGASGDLHHALCREADGKPLCSGRGEC
SCNQCLCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCS
TETDSCVSSDGQMCSGRGACVCGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFN
SGRLADNQTCQKHCKDEIITTVDVLETDDPNAILCAYPVNNCVMKFTYLELPSGKSNLTV
LKEPACSSAPSAVTIVLAVIGSVVLIGIILLALWKLLVTIHDRREFDRFQSERSRARYEM
ASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccgcccccgctcctc
ctcctgcgcctcctcctcctggccgccccgctgcagcccggcagaggtctcaatctgtgc
accagtggaagcgccacgtcctgtgaagaatgtctcctcatccatcccaagtgtgcctgg
tgctccaaggaggatttcggcagcaccaagtccatcacgtcccggtgtgacttcctgcag
aacctggttgccaacggctgtgccggcgccatcgagagccccagcagcagcatcagcgtg
gtgcagaacgtccccctgagcagcaagggctccggccagacccacctggacgtcacacag
atcacgcctcagaaggtcgccctcaaccttcgtcctggtgaccggacgtcgttccgagtc
caggtgcggcaggtggaggattatcccgtggacctctactacctgatggatctgtccctg
tccatgaacgacgacctggacaacatccgcaatctggggaccaagctggctgaggagatg
cgaaagctcaccagcaatttccgtctggggttcggctccttcgtggacaaaaacatctct
cctttctcctacacggcgccaagataccaaaacaacccctgcattggttataagctgttc
cccagctgtgtcccatcctttggcttccgccacctcctgtccttgacggataaagttgac
cgtttcaatgaagaagtccagaaacagaaggtctcccgcaaccgagatgctcccgagggc
ggcttcgatgccattctgcaggctgctgtgtgcaaggagaagatcggctggcgtaaggag
gcgtctcacctgctggtgttcaccacggatgatgtgccccacatagccctggacgggaag
ctgggggggctggtgcagccccacgatggccagtgccacctgaacgaagccaacgagtac
agcgcgtccagccagctggattatccttccctggcgcttcttggggagaaacttgctgaa
aacaacatccacctgattttcgctgtcacaaaaggtcattacatgctgtacaagaacttc
accactttgatccctggaacaacagtggagattttgcacaaagattccaagaatataatt
gagctgattgtcaaagcctacaacagtattcggtccaaggtggagctcacagtctgggac
agccctgaggacattggcttgaccttcactgccacgtgccaggatggattgagctatcct
gggctcaggaagtgtggggatctcaaaattggagatacggtctccttcgaggtggctgtg
gaggctcggagctgcccggccgaggacacatcccacacgttcaccatcaagccagccggc
ttccgggacacgctggaggtggccgtcacctacagctgcctgtgcggctgcaccggccgc
gccgcgcccgccagcggcaagtgcagcggcaacggcacctacacctgcgggctgtgccag
tgtgagcccggctacctgggcgcccgctgcgagtgcgaggagggcgccagcggggacctg
caccacgccctgtgccgcgaggccgacggcaagcccctgtgcagcggcaggggggagtgc
agctgcaaccagtgcctctgctacgagagcgagttcggcaacatctacggccccttctgc
gagtgcgacgacttctcctgcgccaggtacaagggagtcctctgctcaggtcacggggag
tgtcactgcggggagtgcaagtgccacgccgggtacatcggggacaactgcaactgctcc
acggagacggacagctgtgtgtccagcgacgggcagatgtgcagcggccggggtgcctgc
gtctgcgggaagtgtcagtgcaccgagccgggcgctttcggagagacctgtgagaagtgt
cccacctgcccaggggtctgcagcactaaaagggactgtattgaatgcaagctgtttaac
tcaggaagactggctgataaccaaacctgccaaaagcactgcaaggatgagatcatcacc
actgtggatgttcttgaaacagatgaccccaacgcgatcctctgcgcctacccagtgaac
aactgcgtcatgaagttcacctacttggagcttcccagtgggaaatccaacctcaccgtc
ctcaaagagccagcctgcagctcagcccccagcgctgtgaccatcgtgctggcagtgatt
ggcagcgtggtgctgattggcatcatcctgctggctctctggaagctgctcgtcaccatc
cacgacaggcgggagttcgaccggttccagagcgagcgctcccgcgccagatatgaaatg
gcatccaatcctctctacagaaagcccatttccacgcataacgtcgagttcacgttcaac
aagctcaacaagtcatacaatggcacagttgactga
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