Sylvia atricapilla (blackcap): 136363922
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Entry
136363922 CDS
T10263
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136363922 (MSH4)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Meiosis-specific proteins
Others
136363922 (MSH4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_III
MutS_II
MutS_IV
MutS_V
AAA_14
nSTAND3
ATPase_2
AAA_29
AAA_27
AAA_23
CTD
Motif
Other DBs
NCBI-GeneID:
136363922
NCBI-ProteinID:
XP_066179458
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All DBs
Position
8:complement(1108..17663)
Genome browser
AA seq
706 aa
AA seq
DB search
MAGAGGRAAASATSESYTGRGSSTPGVGGLAEQTPRYSLGLLQTPHSSESTGGSSSGGAR
PGGSSGDGLAAGRAAGSSAMRPTVSERGESYFGDKSSCAENANTLNLTSSSSVRGLNSTC
LGKTPLSSGRSGCRSHTPFTGYSATSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDL
KNPEIILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFNLITEHFKNVTFT
TVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKS
LKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEP
LVDAETINTRLDCVQELLQDEELFFGLQAVVSKFLDTEQLLSVLVQIPKQDTVKTAESKI
TNLIYLKHTLELVEPLKAALKSCNAQLLKAYYNSLEDTRFGIMLEKITTVINDDTRYTKG
CLSMRTQKCYAVKPNVSEYLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFF
IQLNADCSTLPNGKLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCK
LLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIA
MEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgggcgggcgggcggccgcctcggccacctcggagtcttacacgggccgc
ggctcttccacgcccggcgtgggcggtctggcggagcagacgcctcgctacagcttgggg
cttctgcagacgccgcacagctcagagagcaccgggggctcctccagcggcggggcacgg
ccgggcggctccagcggcgatggcctcgcagccggccgggccgccgggagcagcgcgatg
aggccgacggtttccgaaaggggagaatcgtattttggggacaaaagttcttgcgcagaa
aatgctaacacattgaatctcacgagttcttcttctgtgcgaggtctgaatagcacatgt
ttagggaaaacacctctctcttctggtaggtctggttgcagaagccataccccttttacg
ggatattcagctacatcttcatctgcagtttctgctcatactgttgcatcagttattgta
gctgtagtagaaggaagaggacttgccagaggtgaagtaggaatggccagtatagattta
aaaaatcctgagataatattatcacaatttgcagacaatacaacttatgcaaaggttatt
actaaactcaagattttaacaccactagaaataataatgtcaaacactgcttgtgatgca
gggaatacaacaaaattgttcaatctgataacggaacatttcaagaacgtgacttttaca
actgtccagagaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgt
gcctctgaatttagcaccattttcatggaagtccaatcaaagtattactgtcttgcagct
gctgcagctttgctaaaatatgttgaatttattcaaaacgccgtttatgctcctaaatca
ctaaaggtgcgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaa
aatcttgaactggtgattaataacagagattctcggaatggtcacacacttcttggtgtt
ctaaattatactaaaactcctggtggaagtcgaagacttagatccaatatcctggagcct
ctagttgatgctgaaacaattaacactagactggactgtgttcaggagttactccaggat
gaggagctcttttttggtcttcaagccgttgtctcaaaattcctggatacagaacaactg
ctttcagttttggtacagattccaaagcaggatacagttaaaactgctgaatcaaaaata
actaatttaatctacctgaagcataccttagaacttgtggagcctctgaaagctgcttta
aaaagctgcaacgcacagctgctaaaggcttattacaattctcttgaagatacaagattt
ggaattatgcttgaaaagattacaactgtaattaatgatgatacaagatacacaaaagga
tgtctgagtatgaggacccagaagtgctacgctgttaaacccaacgtcagtgaatacctt
gacatagctcgtagaacatacacagaaatagttgatgacatagcaggtatgataacgcag
cttgcagaaaagtacaacctaccaatgaaaacaagtttcagctctgctcgtggatttttt
atccagctgaatgctgattgttcaacattacctaatggcaagcttccttcagaatttaca
aagatcacgaaaatgaaaaacacatatagcttcacttcagcagatttaataaaaatgaat
gaaagatgtcaggagtccctgagagaaatatatcacatgacctacctaatagtgtgtaaa
ctactgaacgagatctatgaacacattcattgcttatacaagctgtctgacattgtatct
atgctggatatgctgctttcatttgcccacgcctgcactctttccgattatgttcgtcca
gaatttaccgatactttagcaatcaagcagggatggcatcccattcttgaaaagatagct
atggaaaaacctgtgtctaacaacacatacctgacggagggcaacaattttgtcattatt
acgggaccaaatatgagtggaaaatcaacatacctgaaacaaattgctctgtgtcaaatt
atggcacagattggtgagtaa
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