Sylvia atricapilla (blackcap): 136364011
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Entry
136364011 CDS
T10263
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136364011 (TRUB1)
Enzymes [BR:
sati01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
136364011 (TRUB1)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136364011 (TRUB1)
Prokaryotic type
136364011 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
136364011
NCBI-ProteinID:
XP_066179627
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All DBs
Position
8:complement(7969899..7996966)
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AA seq
285 aa
AA seq
DB search
MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARLVKV
YSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEHAL
QEDKWTIDEIARSLEHCTALLLGEPARKKLKTEHPGETAVICEDK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctccctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaacgggaacaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaagccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagcctgctcggctagtgaaagtg
tacagcctttctctccagcagttccagccaccactgttcacgctggatgttgaatgtggt
ggtggcttctatgtcaggagcctggtcaatgacattggcaaagagctctccacgtgtgcc
acagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggaacacgccctg
caggaagacaagtggacaattgatgaaattgctcggtccttggagcactgcacagccctg
ctcctgggagagccagctcggaaaaaattgaagacagagcatcctggtgaaactgctgtg
atctgtgaggataagtga
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