Sylvia atricapilla (blackcap): 136364050 Help Entry 136364050         CDS       T10263                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism sati  Sylvia atricapilla (blackcap) Pathway sati04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:sati00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     136364050 (COL17A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF4869 Motif Other DBs NCBI-GeneID:  136364050 NCBI-ProteinID:  XP_066179721 LinkDB All DBs Position 8:12069429..12103067 Genome browser AA seq 1511 aa AA seqDB search MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTAGSGVEKRSYTHG SSYVASSGSGRLNSTSSTSSYRQAQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSS PEFPRKDFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRS PSSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSS SLINAMSHSTGSVFGVPNNLAPSNHTLNAGLSSSSTVFGVQNNLSPSSSSATQNARAASA AYGMKNTSQSNTLASTGVSASAGGTVLSSQGDDILHKDCKFLLLEKEKAPAKEMELLVMT KDTGKVFSASNTGINGGSFAEDTLKKEKQGFSSSYATDTGLKSDANGGLKSVPKRDKDTY AEIRSGDAGGAIGSAPSWCPCGSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVRKLKA RVEDLEKINGGLLAINQGSSKIEKDVSRIDFLHGNAPSSTFPYENEESVWLMVKSRLNKE IERGYFRGERGERGEKGDMGVQGPKGDRGLPGVPGIPGPSGHAGPEGPKGQKGSMGEPGM EGPMGQRGREGMPGPRGEPGPPGFGEKGDRGAVGEPGPPGPPGLPGSAGLKGLMGSPGPQ GPPGPPGLQGFRGEAGLPGAKGEKGASGPPGPKGDQGEKGSRGMTGEQGSRGIPGPPGEP GAKGPVGQAGRDGQPGEKGEPGLMGMPGARGPPGPTGDAGEPGLTGPQGPPGLPGNPGRP GAKGEPGAPGKVISAEGSSTITLPGPPGPPGPPGPTGPPGVPGPVGPAGLPGQQGPQGEK GSPSEAVIETIRTEVSSLASHMLRDLQGRAGPPGPPGPPGESVQGPPGPPGPPGLPGPPG PAGGLGSSMSTSEAFFTGPPGPPGPPGPPGPKGDQGERGPRGFTGEPGDPGLSAFSSHGE RVTIQGPPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPSGGSSQ EIQQYVTDYLKSDNIRHYLTGAQGPPGPPGPPGLITTADGVTLDYAELATRVLSYMTSSS GRYESFSSSVSTTSVLYQELLNLLQREEIRQYLVGPQGPPGPPGPGGDGMSLSLDYDELT RRFISYLSSSGMSIGLPGPPGPPGSPGVSYSDLTAYLRNSEFSGVVGPPGPAGPPGPPGI PGSPGTSLEDVAAYLQNVGYSSLSGVRGPPGPPGPPGPPGFSGTGLLSYGDITNSDEFRS ELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGFVAGSMSSSYQGLRASEHLHGGSLG AEGSHGGTGSSYGSSRSSVSSYHASVGSDGAYDTSMDTDGTFDGLLTEESHRRSAGSSRS YSSSFTGSLDYNELALRVSESLQSRGILQDLMSYTAQGPAGPPGPPGAPGISKVFAAYGN VTADLMDFFRTHGAIQGPPGEKGERGYRGPKGDPGPMGPPGRQGHRGPKGEKGEKGEQLY VGRRKRRSAGV NT seq 4536 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacttatt acagagactgtaaccacaagactgacatccttgccacccaaaggagggagcagcagtggg ctcaaaacatcatcccacacggcagggagtggagtggaaaagcgatcgtacacccatgga agcagctatgtggcctcaagtggaagtggtagattgaattcaacatcatcaacctccagc tacagacaagcccagtctcccagctctactctcaccaaatcacctggctcaacctttgaa agaaaaacctatgtcaaccgccatgcaacatatgaagggagttccagtgccaactcttct cctgagtttcccagaaaagattttgcatctgcctcaacaagagggagaagccaaagtcga gaaagtgaaatacgagtccgactgcagagcgcatctccctctggcagatggacggagttg gatgatgtgaaacgtttgctgaaaggaagtcgatctgccagctgcagccctactcggtca ccatccagtacactcccgataccaaaaaaggcagtggtggagacgaagatggtcactgag agctctcagtcagtgtcgggaacatatgacacaaccatactgaatactgccctcccttca tacatgtggtcctccactctgcctgctgggtcttcccttggtggataccataacagctct tccttgatcaatgccatgtctcactcaacaggatcagtttttggtgttccaaataacctg gctcccagcaatcatactctgaatgcgggcctgagctcttcctctacagtatttggagtt caaaacaacctgtctccaagctcctcttctgcaacccagaatgctagagcagcctctgca gcatatgggatgaagaacacttctcagagcaacaccttggcaagtactggtgtgtctgcc tcagcaggaggaactgttttgagctcccagggagatgacattctgcacaaagactgcaag ttcctgctgctggagaaggagaaggcaccagcaaaggagatggagctcttggtcatgaca aaggacactggcaaagtctttagtgcttctaacactgggattaatggaggatcttttgca gaagacaccttgaagaaagagaagcagggattttcctcatcttatgctacagatactggc ctaaaatcagatgcaaatggagggctgaaatccgtgccaaaaagggacaaagatacttac gcagaaatacgaagtggtgatgcaggaggtgcaattggatcagcaccatcctggtgtccc tgtggttcatgctgtagctggtggaaatggctcctgggtttgcttctagcctggttgttt ctccttggattgctttttggactcattgctctggctgaagaagtgagaaagctgaaagct cgtgtggaagacctggaaaaaatcaatggtggcctcctggcaattaaccaagggagctca aaaatagaaaaggatgtttcaagaatagactttcttcatggtaacgcaccctcctcgacc ttcccatatgaaaatgaggagtcagtctggttgatggtgaagagcagactgaataaggaa atagaaagaggctacttccgaggggagagaggagaacgtggtgagaaaggtgacatggga gtacaaggtcccaaaggtgaccgaggacttcctggtgtcccaggcattcctggtccaagt gggcatgcaggaccagaaggaccaaaaggacagaaaggaagcatgggtgagcctggcatg gaaggtcccatgggacagagaggtagagaagggatgccagggcctcgaggggagccagga ccacctggatttggagaaaaaggagacagaggtgctgttggtgagccaggtcctccaggg ccacctggacttccaggttctgctggcctaaaaggtctgatgggttctccaggcccacaa ggtcctccaggtcctcctggcctacaaggatttagaggtgaagcaggactcccaggtgct aaaggtgaaaaaggagccagtggaccccctggacccaaaggtgatcagggtgagaagggc tctcgtggaatgacaggtgagcaaggctcaagaggaatacctggacctccaggagagcca ggggctaaaggacctgtaggacaagctggtcgtgatggacagccaggtgaaaaaggtgaa ccaggtcttatgggaatgccaggcgccagaggccctccaggacccactggagatgctgga gagccaggtcttacaggaccccaaggaccgccaggacttccaggcaacccaggccgacca ggggctaaaggagaacctggagctccaggaaaagtcataagcgcagagggttcatcgact attactctgccaggcccaccaggtcccccaggcccacctggccccactggtcccccaggg gttccaggccctgttggaccagctggtctccctggacagcaaggtccacagggtgagaaa ggatctccaagtgaagctgtgatagaaaccatcagaacagaagtctcatcattagcatct catatgctgagagatttacaagggcgagcaggaccaccaggtccccctggaccaccaggt gaatctgtgcagggcccccctggacctcctggtcccccaggattgccaggacctccaggc ccagcagggggactagggtcatccatgtccacctcagaagcattcttcacaggcccacca ggtccaccaggtccaccaggaccaccaggcccgaagggagaccaaggtgaacgaggtcca cggggattcacaggagaaccgggtgatcctggcctttcagctttctcctcccacggtgaa agagtcaccatacagggacccccaggcccacctggcccacctggaccaaaaggtgatgca ggtgtcccaggtgcacctggtatcccaggagcatctcgaggtggatccagacaaattcag ggacccccaggacctcctgggccacctggtcctcctggcccgagtggaggttcatctcaa gagattcagcagtatgtcactgactatctgaagagtgacaacatcagacattatctgact ggtgcccaaggcccaccaggccctccaggcccacctggacttatcaccactgcagatggg gtgaccttggattatgcagagctggctacacgtgtcctgagctatatgacaagctcttca ggtcgctatgagtcattttctagctcagtatccactacatccgttttgtaccaagaactt ctgaacctgctgcaaagagaagaaattcgtcagtatctcgttggacctcaaggcccacca ggacctcctgggccaggaggagatggaatgtctctgtcactggattatgatgagctgacc aggaggtttatcagctacttgtcaagttctgggatgagcattggactgcctggaccacct gggcctccagggtcacctggtgtatcttacagtgacctgacagcatacctgcgaaactct gaattcagtggtgttgttgggccccctggtcctgcagggcccccaggacctccagggatc cctggatcaccaggcacctctctggaggacgtcgctgcctaccttcaaaatgttggatac tcttccctttctggagtccggggcccacccggccctcctggccctccaggaccaccaggt ttctctggaaccggcctcctgtcctatggtgacatcaccaacagcgatgagttcaggagt gagctgatccagtacctgaagagtgatgaagttcgaagctacatatcaggaccccctggg ccccccgggccacggggaccaccaggacctaaaggagacagtggctttgtggctgggtct atgtcctcatcataccaagggttacgagcttctgagcacttgcatggaggatcccttggt gctgagggctcccacggaggcacaggcagctcgtatggcagctccagaagcagcgtgtcc tcttaccacgcctcagtgggaagcgatggcgcttatgatacctccatggacactgatggg actttcgatgggctgctgacagaggaatcacacaggagatcagcagggtcaagcaggtcc tacagcagctccttcactggttccctggattacaacgagctggcactccgtgtgtcagag agcctgcagagccgaggtattctccaggacttgatgtcttacactgcacagggacctgca ggtcccccaggccctcctggtgcccctggcatcagcaaggtctttgcagcctatggcaat gtcaccgcagacctcatggacttctttagaacacatggtgccatccaggggccacctggt gaaaagggggagagaggttatcgtggacccaaaggtgaccctgggccaatggggccacca ggacggcaagggcacaggggaccaaaaggagagaagggagagaaaggtgaacaactgtat gttggcagaagaaaaagaagaagtgctggtgtttaa

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