Sylvia atricapilla (blackcap): 136364066
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Entry
136364066 CDS
T10263
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136364066 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136364066 (TAF5)
03036 Chromosome and associated proteins [BR:
sati03036
]
136364066 (TAF5)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136364066 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
136364066 (TAF5)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136364066 (TAF5)
STAGA complex
136364066 (TAF5)
TFTC complex
136364066 (TAF5)
SAGA complex
136364066 (TAF5)
SLIK complex
136364066 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_RIG_2nd
Beta-prop_SCAP
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ASA1
Beta-prop_SPT8
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
DNAI3_WD
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
136364066
NCBI-ProteinID:
XP_066179748
LinkDB
All DBs
Position
8:complement(12665892..12676428)
Genome browser
AA seq
783 aa
AA seq
DB search
MAALHEEPAEVVTVKPDPEAGTPPPPPAVPSAAAPAAVPAAAAEGETTGAGGDAAPPKPA
APGPTASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPASAGLLG
GSGSDADSGEALLGRGTSAAAVTVGGNVATVATSSPGVAAVAAVPPGKVGGAVVVEDQPD
VSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHE
SEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLL
KRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLL
KEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDK
LDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVW
SVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNY
LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY
QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAF
SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL
WDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRRNLLLAAGAY
SSQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcagaggtagtgacggtgaagccggaccccgaggcg
gggacgccgccaccgccgcccgcggtgccttccgccgccgctcccgccgccgtcccggcc
gccgcggcagagggagagacaacgggagccggtggagatgcggcacccccgaagcccgcg
gcgccgggcccgaccgcctccccggcggcgttggaccggcagacgcttgtggccgtactg
cagttcctgcggcgcagcaatctccgcgagtccgaggagatcctacgtcgcgaagcccgg
ctgctcggcgacgacctgggtgccgccgccctgagccccgccagcgccgggctcctgggg
ggctccggcagcgacgcggactccggcgaggcgctgctcggccggggcaccagcgctgcc
gccgtcaccgtaggaggcaacgtcgccactgtcgcgacttccagccccggggtggctgca
gttgccgccgtgccgccggggaaagtgggaggcgctgtggttgtggaggaccagccggac
gtgagcgccgtgttgtcggcttacaaccagcaaggggacccgacgctgtacgaggagtac
tacagcgggctgaaacacttcatcgagtgctccctggactgtcatcgggcagagctgtct
cagctcttttatcctctctttgtgcacatgtacttggaattggtctacaatcagcatgag
agtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgctattaccaggat
gatctgcgtgtattgtccagcttaaccaaaaaagagcatatgaaaggtaacgagaccatg
ctggattttcgaacaagcaagtttgtgctgcgcatttcccgtgactcttaccaactcctg
aagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggagcatctt
tacattgatatctttgatggaatgcctcgcagtaaacagcagatagatgctatggttgga
agcttggctggggaagcaaaacgagaggctaataaagcaaaggttttctttgggttattg
aaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaa
ggaaagcccaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagtaaaaaacag
gaccctaatgctcctccccaaaacagaattcccctgccagaactcaaagactctgacaag
ttggataaagtaatgaatatgaaggaagcagcaaggcgagtgcgtcttggaccagagtgt
ctgccctccatctgtttctacacattccttaatgcttaccagggtctgactgcagtggat
attacagatgactccagcatgattgtaggaggctttgctgactctactgtcagagtgtgg
tctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctcattgat
aaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaag
attttatatggtcacagtggacctgtctatggcaccagcttcagtcctgataggaactat
ctgttgtcctgttctgaggatggcaccgtgagattgtggagtctccaaacattcacatgt
ttggtgggctataaaggacacaattatccagtttgggatacacagttctctccatatggt
tattactttgtgtctgggggacacgacagagtggctcgtctgtgggcaacagatcattac
cagccattacggatctttgctggccatcttgcagatgtgacatgtacccgatttcatcca
aactccaactacattgctacaggctcagcagacagaactataaggctctgggatgttttg
aatgggaattgtgtaagaatatttactggacataagggaccaattcattcattggcattt
tctcctaatggacgattcctggctactggagcaacagatggaagagttctgctgtgggat
attggccatggcttgatggttggcgaactgaaggggcacactgacactatctacgccctc
agattcagtagggatggggagattttagcatcaggttcaatggataacacagttcgtctg
tgggatgctgtgaaggcatttgaagatttagaaactgatgactttactacagccactgga
cacataaacttgcccgaaaactcacaggacttgctactgggcacgtacatgaccaaatca
acccctgttattcatctccatttcacacgcaggaacctgctgctggctgcgggagcctac
agctcacagtag
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integrated database retrieval system
