Sylvia atricapilla (blackcap): 136364101
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Entry
136364101 CDS
T10263
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sati03009
]
136364101 (RRP12)
Ribosome biogenesis [BR:
sati03009
]
Eukaryotic type
90S particles
Other 90S particles
136364101 (RRP12)
Pre-60S particles
Other pre-60S particles
136364101 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
136364101
NCBI-ProteinID:
XP_066179818
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All DBs
Position
8:complement(14247080..14259043)
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AA seq
1315 aa
AA seq
DB search
MAAGAGSGKGALGAAARGAGSSMARSGRLRSGAAAKLKRWRKGHSSDSNPETRQHRLAAR
SRFCSRPAEKSNLTVDAVKLHNELQSGSLRLERASDNARSHMEEDNAEEAATEKSSGTFL
SGLSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKESETEYFAALMTTLE
AVESPESLSAVAYLLNLVLKRVPSPVLIKKFSDASKAFVNIVSSQACSSSTSALRWVLSC
LATLLRKQDLAAWSYPVTLQVYHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAP
EHHPAAPSTAKFCVQEIEKAGGAKEATTTLHVLALLRDVLPCFPAAVVKTCCETLLRVMT
LSHVLVTACAMQAFHSLFSAQASVACLPAELNAQIITALYDYVPSTNDLQPLLTWLSTME
RAHVNLGRLQKDLCWAHLPRLFSAAMNCFLSPHSQVVSGAAQTLETLLSECIAPHMEDVG
TVSASAPAPAAYLCKMFRSVEEGLTYRFHAAWGEVLRVLEMFFETCGKQCHPIMRKCLQS
LCDLRLSPHFPYTAEVDQAVGAAVSTMGPEVLLEAVPLEINGKEETLDFPRSWLLPVLRD
NVQGARLGFFTSYFLPLAATLKSRAVEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTRPTD
VVGAFKGLARTLGMAISERPDLRPTVCQALRTLIHKGCETDAEQAEVGRFAKNFLPILFN
VYSQPEEDGGTSAQRRSVLDTVRAYLTITDPQMVCGFLEKASAKLTSPESSEFTRLSILD
LIVAMAPYADEQSLDSLYRTIQPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLQ
DLQTALLDSLKSAASPAKRPRLKCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARK
NAFMLLVEMGHAFIRFGPTPEEAMQRFLLLIYVGLTGSVTMISCTVLALTRLFFEFKDHL
EFSVVEQLLQNICLLLASRTRDVVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDD
MRRHFRMNLRNLFIKFIRKFGFELVKGLLPVEYHKVLVNIRKAESRSRKQRALKKAAADM
EEEEAPPPQPRGDSMEEILADSEDEEEEEEGRHGSKEWRKQAKQKGQAWLKEGEDDEPLN
FLDPNVSQRVLATKPGPKRSRGVSHDFQMSEDGRLIIHEEELDDDEAKGADEEMADVLQD
VGLRSKKSQKRRFREEPDDEEAEAGTSSQYRAGGSGIHRPLSKEPAFGAEYRSKKGKGDV
KKKGQLDPYAYIPLNRAKLNRRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKSQRS
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggcgccggaagcggaaagggggcgctgggcgcggccgcacgtggagctggg
tccagcatggcgcggagcgggaggctccggtcgggagccgcggccaagctgaagcgctgg
cggaagggccacagcagcgactccaaccccgagactcgccagcatcgtctggctgcccgt
agccgcttctgcagccggccggcagagaaaagtaacttgacggtggatgcagtgaagctg
cacaatgagctgcagtcggggtccctgcgtctggagcgggcgagtgacaatgctcggtcc
catatggaggaggacaatgctgaggaagcggccacagagaagtcctctggcaccttcctg
agtgggctgagcgactgcactaatgtcaccttcagcaaggtgcagcgcttctgggaatcc
aactctgctgctcacaaagagatctgtgcagtgctggcggctgtgacagaggtgatccgc
tcccagggaggcaaggagagcgagacagaatactttgctgcactgatgaccacactagag
gcagtggaatcccctgagtcactgtctgctgtcgcctacctacttaacctcgtcctaaag
cgggtcccaagccctgttcttattaaaaagttctcagatgcctcaaaagccttcgtgaat
attgtgtcctcacaggcctgcagcagctccacctctgccctgcgatgggtcctctcttgc
ctggccacactgctacggaagcaagacttggcagcctggagctaccccgtcactctgcag
gtctatcatggcttgctgagcttttgtgttcataccaagcccaaggtgcggaaagcagcg
cagtacggcgtgtgctctgtcctgaggggcagcgagttcatgtttggcgatgcagcgcct
gagcatcaccctgcagcaccctccactgccaagttctgtgtgcaggagattgaaaaagct
ggaggtgccaaggaggccaccaccaccctgcatgtccttgccttgctgcgggatgtgctg
ccctgcttccctgcagctgtggtgaagacctgctgtgagaccttgctccgagtcatgacc
ctcagccacgtgctggtgacagcatgtgccatgcaagctttccacagcctcttcagcgcc
caggccagcgtggcctgcctgccagctgagctcaatgcccagatcatcactgccctctat
gactatgtgcccagcacgaacgacttgcagccattgctgacctggctgtccaccatggag
agggcacacgtcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgg
ctcttctctgctgccatgaactgcttcctctccccacactcccaggtggtatcaggagca
gcacagaccctggagaccctcctgagtgagtgcattgctccccacatggaggatgtgggc
actgtgtcagcatctgccccagccccggctgcctacctgtgcaagatgttcagatcagtg
gaggaagggctgacataccgtttccatgcagcgtggggtgaagttctgcgagtgttggag
atgttttttgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccagtcc
ttgtgtgacctgcgtctctccccacactttccctacactgctgaagtggaccaggcagtg
ggggctgctgtgagcaccatgggtcccgaggtgctactggaagctgtgcccctggagatc
aatggcaaggaggagacgctggatttcccccgcagctggcttctgccggtgctgcgggac
aacgtgcagggtgcgcggcttggcttcttcaccagctactttttgcctttggccgccacc
ctgaaaagcagagccgtggagtttacacaggctgggaagagtgtggaggccaagatctat
gacacactgcagtggcaggtctggactctgctgcctggcttctgcacccgtcccacagat
gtggtgggggccttcaaggggctggcccgcacgctgggcatggccatcagcgagcgccca
gatctccgccccactgtgtgccaggccttgcgcaccctcatccacaaaggctgcgagaca
gatgcagagcaggcagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaac
gtgtacagccaaccagaggaggatgggggcacaagtgctcagcgccgctctgtgctggac
actgtccgtgcttacctcaccatcacagatcctcagatggtgtgtggattcctagagaaa
gccagtgcaaagctgaccagtcctgagagttctgagttcaccagactctccatcctggac
ctgatagtggcgatggcaccctatgctgatgagcagtccctggactccctgtaccgtacc
attcagccttccctccagagcaaagagcgcagcatgcagaagaaggcatatcgtgtgctg
gaggaggtgtgtgctgctccccatgctccctgccaggcctttgtccgctcccatctccag
gacctgcagacagcactgctggactcactcaagagcgcagcatccccggccaagaggcct
cggctgaaatgcctgttccacattgtaaagcagctatctgcagagcacgagccttttgtc
actgccctggtcccagaggtcatcctatgcaccaaggaggtgtcagtgggggcccgcaag
aacgccttcatgctgcttgtggaaatggggcatgctttcatccgttttggacccactcct
gaagaggctatgcagcggttcctgctcctgatctacgtggggctcacgggctcagtcacc
atgatcagctgcactgtgctggcactgacccgcctgttcttcgagttcaaagatcacctg
gaattcagtgtggtggagcagctcctgcagaacatctgcctgttgctggcctcccgcacg
cgggatgtcgtcaaggcagccctgggattcctgaaggtcacactgctgctggtggacacc
aagctcctggccaagcatgtccagacaatgctggaggctgtggggaacctttcagatgac
atgagacgccacttccgtatgaatctgcgaaacctcttcatcaagttcatccgcaagttc
ggctttgagctggtgaaggggctgctgccagtcgagtaccataaggtgctggtgaacatc
cgcaaggcggaatcccggagccgcaagcagcgtgccctgaagaaggcagctgcagatatg
gaggaggaggaggcaccaccaccacagcccagaggagacagtatggaggagatcctggct
gactcagaggatgaggaggaggaagaggaggggcggcatgggagcaaggagtggaggaag
caagcaaagcagaaaggccaggcatggctcaaggaaggggaagatgatgagcccctcaac
ttcctggaccccaatgtgtcccagagggtgctggctaccaagccaggccccaagcggtcc
agaggagtgagccacgatttccagatgtctgaggacgggcgcctgatcatccatgaagag
gagctggatgatgatgaagccaaaggagcagatgaagagatggcagatgtgctgcaagat
gtgggactccgcagtaagaaaagccagaaacgtcgattcagagaggagccagacgatgag
gaagctgaggctggaacctcttctcagtatagagctggaggctctgggatccatcggcca
ctgagcaaggagccagcctttggtgcagagtatagatccaagaaaggtaaaggtgatgtg
aagaagaagggccaacttgacccctatgcctacatccccctgaacagagctaaactcaac
agaaggaagcgggcgaaaatgcagggccagttcaaaggcttgatgaagggagcccagcgc
ggggccaaggccggccgccggaaccgtctcaagtcccaacgctcctga
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