Sylvia atricapilla (blackcap): 136364102
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Entry
136364102 CDS
T10263
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136364102 (MMS19)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136364102 (MMS19)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136364102 (MMS19)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
136364102 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_GCN1
TPR_CAND1
TOR1L1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
136364102
NCBI-ProteinID:
XP_066179819
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All DBs
Position
8:complement(14271178..14286163)
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AA seq
1022 aa
AA seq
DB search
MAAAGAGAEALAASVRDFVSGQQEGRAAEVAAGVKDGTWTVLQLVEALGFCLENTDPRTR
GRGIQLLSQVLLQCYSLLQEKEVLHLVLFYESRLQDHHLVIPSVLQGLRALSMCDVLSPG
LAVSVLKAIFQEVHVQSLMQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQVMDGEK
DPRNLLVAFQIVRDLIAKDYALGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDLILSL
RAVLTSTPQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSLWSSL
RREVFQTASEKIETECLAALHALSACLSRSVLSSDSEDLLDSFLSSILQDCRHHLCEPDM
KLVWPSAKLLQAAAGASLRTYHCITHSVLPLLLEQYTKHTQSSQRRTILEMLLGFLDLQQ
KWGHVEEDESVLLSLQAAVCSVVFSALTDPSVQLQLVGIKTLTVLGSLQGFLSSSDLELV
VDHLIRLALHEEDSQSSEAAMEAAGSLAPTYPKVFSGRMVPRLEEELQSEREESYHNHHS
LQQRCLQALAAVSTHTSIVRETVPVLLQHLQKVQKGTEASNTQDVVSVCQSLHRVALQCQ
QDAESCWYFHQTVVPCLLAMAVQAAMQESTHRLPGKALLEEEVLAAMIPVISAATTHLSP
ELAAQSVSHVVPLFLDGDVSFLPQNSFPCSFQPFGDGECLEAQRRLIALLMAFVCSLPRN
VAIPQQEWLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAMNRMEPT
LAEGPRRTQALTLLLWVTKALVLRYHPLSSCLTDKLLGLLGDMELGPAAADGFLLLMAES
PDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHLPKPVLV
TELPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQVMSLHVDTLVTKFLNLTSSPTM
AVRIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEWFLLGSP
GR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggggccggcgcggaggctctcgccgcctccgtccgggacttcgtgtcc
gggcagcaggaaggccgcgccgcggaggtggcggcaggggtgaaagatggaacatggaca
gtgctgcagcttgtggaagccctggggttttgcctggagaacacagatccccggacacga
gggcgaggcatccagctattgtcacaagtcctgctccagtgttactccctgctccaggag
aaggaagtgctacatttggtcctgttctatgagagccggctgcaggatcatcacctggtg
attccctcagtactccagggactccgagcactgagcatgtgtgatgtgctgtccccaggg
ctagcagtgtctgtgctcaaagctatcttccaggaggtacatgtgcagtccttgatgcag
ctagaccgccacacagtctacagcatcatcaccaacttcatgagcaccagggaggaagag
ctgaaaggcctgggtgccaacttcaccttcggcttcatccaggtcatggatggggagaag
gatccccgcaatctgctggtggccttccagattgtgcgtgatctcattgccaaggactat
gccctgggtccctttgtggaggagctgtttgaagttacatcttgctatttccctgttgat
tttactccaccccccaatgatcctcatggcatccagagggaagacctgattctgagcctc
cgggctgtactgacttctacaccccagtttgctgagttccttctccctctgcttattgag
aagttggactcggaactgcaaagtgccaagcttgactcgctgcagactctgactgcctgc
tgtgccatctacgggcagaaggagctgcaggaattccttcccagcctctggtcgtccctg
cgcagagaggtgttccagacagcgagtgagaagatcgagacggaatgcctggctgcactg
catgctctctctgcctgcctctcccgctccgtgctcagctctgattctgaggatctgctg
gattccttcctcagcagcatcctgcaagattgcaggcaccatctgtgcgagcccgacatg
aagctggtgtggcccagtgccaaactcttgcaggcagcagcgggtgcctccctccgcacc
taccactgcatcacccatagcgtcctgcccctgctgctggagcagtacaccaagcacacg
cagagcagccagaggaggacaatcctggaaatgctgctaggcttcctggacttacagcag
aagtggggacatgtggaagaagatgaaagtgttctgctgtcgctccaagctgcagtttgc
tctgtggtgttctcggcgctgacagatcccagtgtgcagctgcagctggttgggatcaag
acactgactgtcctgggctccctgcaaggcttcctgtcttcctctgatctggagctggtt
gtggatcatctcattcgtcttgctttgcatgaggaggattcccagagcagtgaagcagca
atggaggcagctgggtccctggcccccacctacccaaaagttttctctggacgcatggta
cccaggcttgaggaggagctgcaatcagagcgggaggagagctaccacaaccaccactcc
ttgcagcagcgctgcctgcaggccctggcagctgtatccacccacaccagcattgtgagg
gagactgtccctgtcctgctacagcatctccagaaggtgcagaaagggactgaggccagc
aacacccaagacgtggtctctgtgtgccagagcctgcaccgcgtggctctgcagtgccag
caggatgccgagagctgctggtacttccaccagacggttgtgccgtgcctgctggccatg
gctgtgcaggcagccatgcaagagagcacgcatagactgccaggcaaggcactgctggag
gaagaggtgctggctgccatgatcccagtcatcagtgctgccaccactcacctgagccct
gagctggctgcccagagtgtgtctcatgtggtgcccctttttctggatggcgatgtctcc
ttcctaccccaaaacagttttccctgctccttccagccttttggggatggagagtgcttg
gaagcacagagacgcctgatcgccctcctcatggccttcgtctgctccttgccccgcaat
gtggcaatccctcagcaggaatggctgctccgggagctgctggcattgagctgttcctgc
aactgtcccttcacagccaccacagctgccaagtgctttgcaggcctggtgaacaagcac
ccagcagggcagcagctggatgaaattttgcagcttgcaatgaacaggatggagcccacc
cttgcagaggggccccgccgaacacaggcactcaccttgctgctctgggtgaccaaagcc
ttggtgctgcgctaccaccccctgagctcctgcctgacagacaagctgctgggcctgctg
ggtgacatggagctgggccctgccgcagccgatggcttcttgctgctcatggctgagtcc
ccagacgtgctgcacaagggctgccatgccgacgtgcgcatcatgttccgccagcgcttc
ttcactgacaacgtccctaagctggtgcaaggcttccatggggctggccctgacgtgaag
gccaattacctgaagggcctgtcccatgtgctgaaccacctccccaaacctgtgctggtg
acagaactgcccacgctgctgtccctcctgcttgaggccttgtcctgctcagatcgtgta
gtacagctctccacactgagctgtctccacccactgctgctcgaagctccccaggtcatg
agcctgcatgtcgacacactggtcaccaagttcctcaacctcacctccagccccaccatg
gctgtccgcatcgccgccctgcgctgtgcccatgccctcaccagtctgcccacaacagtg
ctgctcccatacaagggccgagttatccgggcactggccaagcctttggatgacaaaaag
aggctggtgcggaaggaagcagtggcagcacgtggggaatggttcctgctcgggagccca
ggcaggtga
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integrated database retrieval system
