Sylvia atricapilla (blackcap): 136364180
Help
Entry
136364180 CDS
T10263
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4 isoform X1
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136364180 (SOX4)
Transcription factors [BR:
sati03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136364180 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
136364180
NCBI-ProteinID:
XP_066179957
LinkDB
All DBs
Position
1:complement(60959568..60964279)
Genome browser
AA seq
433 aa
AA seq
DB search
MVQQTNTAENTEALLAAETSDSGAGIELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNSSAKPGDKADKGGGGGAGGGSAGGGSGGPAAPAKPAPKKGGG
GGSKPSPAGGGGGGAGGKPHGKAAGGKAAPFPGEPSAALLPPEHQALYKPRGAAGAPSGA
GKPLAEKKLKRVYIFGGGQAAAASASPGGAVPGSPTLSSSAEAGDPLSLYEEGGGGAGRP
DGDCGGVACPSPSGSGSPSDHRSYTSLRASSPAPSTAHSSSASSHSSSSSSSGSSSSDDE
FEDDLLDLNPSPGFESMSLGSFSSSVLDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGD
WLESSISNLVFTY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagaccaacacggcggagaacacggaggcgctgctggccgccgagacctcc
gactccggggccggcatcgagctgggcatcgcctcctcccccacgccgggttccaccgcc
tccacggggggcaaggcggatgacccgagctggtgcaagacgcccagcgggcacataaag
cggcccatgaacgccttcatggtatggtcacagatcgagcggcgaaagatcatggagcag
tcccccgacatgcacaacgccgagatctccaagcgcctgggcaagcgctggaagctgctc
aaggacagcgacaagatccccttcatccgggaggcggagcggctgcgcctcaagcacatg
gcggactaccccgactacaagtaccggcccaggaagaaggtgaagtcgggcaacagctcc
gccaagcccggcgacaaggcggacaagggcggcgggggcggcgccggcgggggcagcgcg
ggcggcggctccggcggccccgcggcccccgccaagcccgccccgaagaagggcggcggc
ggcggctccaagccctcccccgcgggcggcggcggcggcggcgcgggcggcaagccccac
ggcaaggcggcggggggcaaggccgccccgttccccggggagccctcggccgccctgctg
ccgcccgagcaccaggcgctctacaagccccggggggcggcgggcgcgccctcgggagcc
ggcaaaccgctggccgagaagaagctgaagcgggtctacatcttcggcggcgggcaggcg
gcggccgcctccgcctcccccggcggcgccgtgcccggcagccccacgctgagcagctcg
gcggaggccggcgaccccttgagcctctacgaggagggcggcggcggcgcgggccggccc
gacggggactgcggcggcgtcgcctgcccctcgccctccggctccggctcgccctcggat
caccgcagctacaccagcttgcgcgcctcctccccggccccctcgacggcgcattcctcc
tccgcgtcctcccactcctcctcctcttcctcctccggctcctcttcgtcggacgacgag
tttgaggacgacctcttggacctgaaccccagccccggctttgagagcatgtccctgggc
agcttcagctcctcggtgctcgaccgggacctggattttaacttcgagcccggctcgggc
tcgcactttgagttcccggactattgcacgcccgaggtaagtgagatgatctcgggggac
tggctggagtccagcatttccaacctggtcttcacttactga
DBGET
integrated database retrieval system
