Sylvia atricapilla (blackcap): 136364215
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Entry
136364215 CDS
T10263
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136364215 (CDKAL1)
Enzymes [BR:
sati01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
136364215 (CDKAL1)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
136364215 (CDKAL1)
Prokaryotic type
Methylthiotransferases
136364215 (CDKAL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
136364215
NCBI-ProteinID:
XP_066180028
LinkDB
All DBs
Position
1:complement(61093406..61473147)
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AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRQFVRRNVFPKVRKRNSQKNVQADDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNSFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGEPVSDARVHTASITRPLAKGEVSGLTEEFRRSPQNGTNWKAQPSAEIPVKTRL
SSWMALQLPWQQEGGGLKILSVSLALLAVLVMFYYRGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggacattgaagacatcgtgtcagcagaagat
ttgaagccacacgatcggcagtttgtgcgaaggaatgtttttcccaaagtgcgaaaacgc
aactcccagaaaaacgttcaggcagatgatgagcccccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatgggggtgttctcacaataactcggatggtgaatac
atggctggacagctggctgcatatggatacaaaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaggaagggaagaagaaagttgttctagcaggctgtgtaccacaagcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcaacagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttaggaggagcacgcctggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacaggatgcctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttatcctattgaagaactggtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccacgagtatatgcttttctgcacataccagtt
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcccggaataacaattgctacagacatc
atttgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctgtacaggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcaaagagttctggta
acagaagaatcctttgactccaattactacgttgctcacaattctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaagggggagccggtatcagatgccagagttcacactgcatccatc
accagaccgttagcaaaaggagaagtttctggcttaacagaggagttcagacgttcacca
cagaatggcacaaactggaaagcacagccttctgcagagatcccagtgaaaacacggctc
agctcctggatggctttgcagctcccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactacagaggaatgaaaaca
gaactgtga
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