Sylvia atricapilla (blackcap): 136364225
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Entry
136364225 CDS
T10263
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136364225 (PAX2)
04131 Membrane trafficking [BR:
sati04131
]
136364225 (PAX2)
03036 Chromosome and associated proteins [BR:
sati03036
]
136364225 (PAX2)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
136364225 (PAX2)
Membrane trafficking [BR:
sati04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
136364225 (PAX2)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
136364225 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
136364225
NCBI-ProteinID:
XP_066180039
LinkDB
All DBs
Position
8:19413773..19512955
Genome browser
AA seq
500 aa
AA seq
DB search
MTGDFAVRVVKESTTNGVFLVCVGCCVFFFFSLSPAGHGGVNQLGGVFVNGRPLPDVVRQ
RIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKI
AEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVT
APGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQS
SVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDE
VKSSLSTSANPDLGTNVSGPQTYPVVTENLSSPLSIKQEPHGASLTPFTPTTPVGSGQAD
LQPFHMALSDDASTPCYSAFLHHGAHFGQSSSQPLIAGRDMASTTLPGYPPHVPPTGQGS
YPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPALLMPHPGAPHLPLLPLPMTATS
YHGNHMKLQGDSLGLHIVPV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactggagattttgcagtacgagtggtaaaagaatccacgactaacggtgtgtttctg
gtgtgcgtgggttgttgtgtttttttttttttttctctttccccagcagggcacgggggt
gtgaaccagctcgggggggtgtttgtgaacggcaggcccctacctgacgtggtgagacaa
aggatagtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgg
gtcagccacggttgtgtcagcaagatcttgggcaggtattacgagacgggaagcatcaag
cccggcgtgatcggaggctccaaacccaaagtggccacccccaaagtagtggataaaatc
gccgagtacaagagacaaaacccgacaatgttcgcctgggagatccgggacaggttattg
gccgaaggcatctgcgacaacgacacggtccccagcgtctcgtccataaacaggatcatc
agaaccaaagttcagcaaccttttcacccaacaccagatgggagtgggacaggtgtgact
gcaccaggacatactattgtacccagcacagcatcccctcctgtctccagtgcctccaat
gatccagtgggctcttactccattaacgggatcctggggattcctcggtcgaatggcgag
aagaggaaacgtgatgaagatgtatccgagggctcagttcccaatggagattcccagagc
agcgtggacagtttgcggaagcaccttcgtggcgacactttcacccagcagcagctggaa
gctttagatcgagtttttgagcgtccttcttaccctgacgtctttcaaacatcagagcac
atcaaatctgagcagggtaatgagtactccctcccagctctgacccctggtctcgatgaa
gtcaaatcaagtctatccacctctgctaacccagacctggggacaaatgtgtcaggaccc
cagacgtaccctgtggtgaccgaaaacctctcctctcccctcagtataaagcaagagcct
catggagcctctctcacccctttcacccccaccacgccggtcggctctgggcaggctgat
cttcagcccttccacatggccctttcagacgatgcgtccacgccttgctacagtgccttc
cttcatcatggtgcccactttgggcagtccagcagccagcctctgatagcaggtcgtgat
atggcaagtaccaccttgcctggctacccaccccatgtacccccaactggacaaggcagc
tacccaacatcaactcttgcaggaatggttcctgggagcgagttctcagggaacccctac
agccaccctcagtacaccacctacaacgaggcctggcggttcagcaaccctgcattacta
atgccacatcccggggctccgcacctcccactgctgccgctgcctatgaccgccactagt
taccatggaaaccacatgaaactgcagggcgacagcttaggcctccacattgtacctgtc
tga
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