Sylvia atricapilla (blackcap): 136364242
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Entry
136364242 CDS
T10263
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136364242 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sati04990
]
136364242 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
136364242 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
EsxC
Motif
Other DBs
NCBI-GeneID:
136364242
NCBI-ProteinID:
XP_066180072
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Position
8:complement(20171620..20214751)
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AA seq
394 aa
AA seq
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MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQQRPTQFPCA
FSMTYQPAGLNSPPPGAHVGAGAGLWPVGAMQAPTASVYDPLQSSELRRRHSASSSPSQV
RVGPEQLKHVAQVCPKSPVEVEVPGLKVLHVQFNSPLQLYSQSNIMDTLQGQISSVSPDF
PSLDQHNQTPGNIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPS
GFRSVKAPTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQ
KGHFFVEDQIYCEKHARERVVPPEGYEVVTVFPK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggggacacaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacacaccttgaggcgcaaaacaaaatcaagggctgcacagatgaactgactctgaca
gtcagcagaacggaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacagcagagaccgacgcagtttccgtgtgcg
ttcagcatgacataccagcccgctggtctgaacagcccacctcccggtgcccatgtgggt
gcaggggctggcctgtggccggtgggtgcaatgcaggctcccacggcctcggtgtatgac
cctctgcagagctccgagctgcggcgcaggcacagcgcctcctccagccccagccaggtc
cgagtggggcctgagcagctgaagcacgtggcccaggtctgccccaagagccctgtggaa
gtcgaggtgccgggactcaaggtgctgcacgtgcagttcaattctcccctgcagctctat
tcgcagagcaacatcatggacaccctgcaggggcagatctcttctgttagccctgatttc
cccagtttagatcagcataaccagaccccaggcaacattgccatagacaaacaatctgag
gtttacaagatgctgcaggagaatcaagagtcaaatgagccacccagacagtctgcttca
tttcttgtattgcaagagatcttggagtcagaggagaaaggagaccctaccaaaccatct
ggatttaggagcgtcaaagccccgaccacaaaggtggcctcatcgattgggaatgcccag
aagttgcccatgtgcgacaagtgcggatctggcattgtagggatgtttgtgaagatccgg
gacaagcagcgtcaccccgagtgctacgtgtgcagcgactgtggcaccaacctcaagcag
aagggacacttctttgtggaagaccaaatctactgcgagaagcacgcgcgggagcgggtg
gttcccccggagggctacgaggtggtcaccgtcttcccaaagtaa
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