Sylvia atricapilla (blackcap): 136364285
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Entry
136364285 CDS
T10263
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03020
RNA polymerase
sati04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136364285 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
136364285 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sati03021
]
136364285 (POLR3A)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136364285 (POLR3A)
Transcription machinery [BR:
sati03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
136364285 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
136364285
NCBI-ProteinID:
XP_066180200
LinkDB
All DBs
Position
8:complement(23445456..23482996)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKSLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSTFLQSFETAIEYNKEVEPLLGRAQENLNPLVVLNLFKRIPVEDIPLLLM
NPQAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKVKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNELVLTSESIMKKNEFLC
CQDSFLQALTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICVSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHVDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPRRPLIFDHNEFHIPILT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacggatgtggccaagaaaataagccacatctgtttt
ggcatgaaatctccagaagagatgcgtcagcaagctcacattcaagtggtcagcaaaaat
ttgtatagtcaggacaaccatcactctccactgcagtatggagtgctggaccatcgcatg
ggaaccagtgaaaaagaccgtccctgtgaaacctgtgggaaaagtctggctgattgttta
gggcattatgggtacattgacttagagctaccatgttttcacgtcgggtacttcaaagct
gtgataggcatcttacagatgatctgcaaaacctgttgccgcattatgctgtcagtggaa
gagaaaaagcagtttttagattacctaaaacgacctggccttacgtatctccagaagagg
gggctaaaaaagaaagtgtctgagaagtgccgaaagaaaaacacttgtccttactgtgga
gcctttaatggaactgtgaagaagtgtggtttgttgaaaataatacacgaaaagtacaag
acaaataagaaagtcgtagatccaatagtatctacttttctccagtcctttgaaactgcc
attgaatataacaaagaagtagaacccttactgggaagagctcaggaaaacttgaatcct
ttggtagtattgaacctctttaaaagaatcccagtggaagacatccctctacttctgatg
aacccgcaagcaggtaaaccttcagatctgatcctcacacggctcctggtgcctccactg
tgtatcagaccctctgttgtgagcgatttgaagtctggcaccaatgaggacgatttgaca
atgaaactgacagagatcattttcctcaatgatgtgataaaaaagcataggatatcagga
gccaaaacacagatgattatggaagactgggattttcttcaactgcagtgtgccctgtac
attaatagtgagctgtctggaatacccctcaacatggcacctaaaaaatggaccaggggt
tttgttcaaagacttaagggaaagcaaggtcggtttagaggcaatctgtctggaaaaaga
gtggatttttctggcagaacagtcatttcacctgatcctaacttaagaatagatgaagtg
gcagtgcctattcatgttgctaaaatactgacctttcctgaaaaggtgaacaaagcaaat
attaattttatgaggaaactggtctgtaatggtcctgatgttcatcctggagcaaacttc
atacagcagaggcacacccagatgaaaagatttttgaaatacgggaaccgagagaagatg
gcccaggagctgaagttcggtgatattgtggagcgacatctgatagacggtgacatcgtc
ctgttcaacaggcagccctctctgcacaagctgagcatcatggctcacattgctagagta
aaacctcacaggacattcaggttcaatgaatgtgtctgtacaccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaagaaatggagaacctcttattgct
gctattcaagacttcctcactggtgcatatcttcttacattgaaagataccttttttgat
cgagccaaagcctgtcaaatcattgcttctatcctggttggcaaggatgaaaaggttaaa
gttcgtcttccacccccagcaattctgaagcctgtaacactctggacaggaaaacaggtt
ttcagcctcattctcaaacccagtgatgattgtcctgtaaaagccaaccttcgaacaaag
ggcaaacagtattgtggcaaaggggaggacctatgttacaatgattcctatgtcacaatt
caaaacagtgagttaatgagtggcagtatggacaaaggaacactggggtcaggatccaag
aacaacatcttctacatcttgctgagagactggggccaggtggaagctgcagatgccatg
tcacgtctggccagacttgctccagtctatctttctaatcgtggcttttcaattggaatt
ggtgatgtaacccctgggcagggcctgctaaaagctaagtatgagctgctgaatgctggc
tataagaaatgtgatgagtatattgaagctctgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacactggaggccttaatccttaaagagctgtctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtcccctgatcatg
gctctctgtggctctaaaggctccttcattaacatatcccagatgattgcttgtgtaggg
cagcaggctatcagtgggtcccgtgttcctgatggatttgagaacaggtccttgcctcac
tttgagaagcattctaagctccctgcagcaaaggggtttgttgcgaacagcttctattct
ggattgactcccactgaattttttttccacacaatggctggtcgagaaggtctggttgat
acagctgtaaaaacagctgaaactgggtatatgcagagacgtctggtaaaatcccttgaa
gatctttgctcacagtatgatttaacagtcagaagttctactggtgatattatacagttt
atttatggaggagatggcttggatcctgcagctatggaaggcaaggatgagccactggaa
ttcaagcgagttctagacaatatcagggctgtctatccgtgccaaagtgaaccagccctg
agcaaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgaatttctttgc
tgccaagacagttttctgcaggcattaactgagacaggttatgaaaaatataatgaggaa
attaaaaaattcatcaaaggtgtttctgagaagattaaaaaaactagagacaagtatgga
attaatgacaatggcacaacagagccaagagttttatatcagttggataggattactcca
acacaactagagaagtttctggagacttgtagagacaaatacatgagggcacagatggag
cctggttctgcagtgggagctctttgtgcacagagtattggtgagcctggcacacagatg
actctgaagactttccattttgctggtgttgcttcaatgaacattactttgggtgtgcca
agaatcaaagaaatcattaatgcttcaaaggctattagcacccctattataacagcacag
ttggacaaagatgatgatcctgattttgcccgtctcgttaaaggaagaattgagaaaact
ttgttaggagagatttctgaatatattgaggaagtgtttcttccagatgactgtttcatc
ctagtgaagctgtctttagagcgcattagactgctgagattagaggtgaatgcagagact
gtgcgctactcgatttgtgtctctaaactcagagtgaagcctggggatgttgctgtccat
ggagaagcagttgtatgtgtcactcctcgtgaaaatagcaagagttccatgtattatgta
ttgcagtccctcaaggaagagctaccaaaggttgtagtgcaaggcataccagaggtttcc
cgagctgtcattcatgttgatgaacaaagtggaaaggaaaaatacaaacttctggttgaa
ggtgataatctacgagctgttatggctactcatggagtgaaaggaacaaaaacatcctct
aacaacacttatgaggtagagaaaactctgggaattgaagctgctcggacgaccattatc
aatgagattcaatataccatggtgaaccatggcatgagcattgacaggagacatgtgatg
ttattgtctgatctaatgacttacaagggtgaagtgctgggcattaccaggtttggactg
gcaaagatgaaggaaagtgtgttgatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgagtgcatcatc
atgggaattccaatgaatattggaacaggactttttaaactgttacacaaagcagacaaa
gaatcaacccctcccaggcggcctctgatatttgatcataatgaatttcatattcccatt
cttacatag
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integrated database retrieval system
