Sylvia atricapilla (blackcap): 136364286
Help
Entry
136364286 CDS
T10263
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
136364286 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136364286 (KCNMA1)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
136364286 (KCNMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
136364286
NCBI-ProteinID:
XP_066180204
LinkDB
All DBs
Position
8:complement(22853000..23279167)
Genome browser
AA seq
1254 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEVQKINGGGDTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNP
IESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV
YLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVE
NSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFAS
YVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVF
LHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAED
ASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
CLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELV
FAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAYFYCKACHD
DITDPKRIKKCGCKRQVKNAARSSYPKCSYQFKNATTNALIDAKSTEGIPEPVPLVNNRK
GSLFLPNNPSLLHLNLLSSVEQGKSTYCRLQRALSLPVKYRYHSQKPGLNQDLLEDEQPS
TLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKYDSTGMFHWCPAKD
IEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKHIVFVGS
LEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKE
CILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTSPDNSPVHGLLRQPSITTGANIPII
TELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRT
LVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDL
FCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNA
GQSRASLSHSSHSSYSSSKKSSSVHSIPSTANRPNRTKTRDSRDKQKYVQEDRL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggtccagaagatcaatggtggtggagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaaccca
atagaatcctgccagaatttctacaaagatttcacattacagatcgacatggctttcaat
gtgttcttcctactctacttcggcttgcgttttatagcagccaatgacaagctatggttt
tggctagaagttaactcagtggtagatttcttcacggtccctccagtatttgtgtcagta
tatttaaacagaagttggcttggtttaagatttttaagagcccttagactgatacagttt
tcagaaatcttgcagtttctgaatatacttaaaacaagtaattccatcaagctagtgaat
ctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacatttggtggag
aactcaggggatccatgggaaaatttccaaaataatcaaccactgacatattgggaatgt
gtttatttgctgatggttacaatgtccactgttggctatggagatgtttatgcaaaaaca
acccttggtcgccttttcatggtcttcttcatccttgggggattggccatgtttgccagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaaagcgtgtcg
aacttcctgaaggacttcctgcacaaggatagggatgatgtcaatgtagaaatcgtcttt
ctgcataatatctcccctaaccttgagctggaagctctttttaaacgacacttcactcag
gtggaattttatcagggttcagtccttaatccccatgacctggcgagagtgaagatagag
tcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagatgctgaagat
gcctccaatattatgagagttatttccataaagaattaccatccgaagataagaattatc
actcagatgttgcagtaccacaataaggcccatcttctgaatatcccaagctggaactgg
aaagaaggggatgatgcaatctgtcttgctgagctgaagctgggtttcatagcccagagc
tgcctggcaccaggcctttcaacaatgttagccaacctcttctctatgaggtcattcata
aagattgaggaggatacgtggcagaaatactacctggaaggagttgcaaatgaaatgtat
acagaatatctgtctagtgcctttgtgggtttgtccttccctgcagtttgtgaactggtg
tttgcgaaactgaagctcttaatgatagccatagaatacaagtcggagaaacgcgaaagc
agtatattaatcaatcctggaaaccatgtcaagattcaagaagggaccttaggattcttc
attgcaagtgatgccaaagaagtaaaaagggcatatttttactgcaaggcctgtcatgat
gatatcacggatcccaaaaggataaaaaaatgtggctgcaaacggcaagtaaagaatgca
gctagatcaagttacccaaaatgttcatatcaattcaagaatgcaactactaatgcattg
attgatgccaagtccactgaaggaatcccggaacctgttccacttgttaataaccgtaaa
gggagcctcttcctacccaacaacccctcgctgctgcaccttaacttactgagttctgtt
gaacaaggaaaatctacctactgtagattgcaaagggcactcagcttgcctgtaaaatac
cgctaccattcccaaaagcctgggttgaaccaagatctccttgaagatgagcagccgtcg
acactatcacccaaaaaaaagcagcgaaatggaggcatgcgaaattcacccaactcctca
cccaaactgatgaggcatgaccccttgttaattcctggcaacgagcagattgacaatatg
gatgccaatgtgaaaaaatacgactctacagggatgtttcattggtgtccagccaaagac
atcgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagtgggcatgta
gtcgtttgcatatttggggatgttaaatctgctttgattggattaagaaatttagtgatg
ccattacgagccagcaactttcactaccatgaactcaagcacattgtgtttgtgggttca
cttgaatacctgagaagggaatgggagacactgcataacttccccaaggtttcaatcttg
cctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctctgcgacatg
tgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcaggacaaggaa
tgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcattggggtcttg
caggctaattcccaaggctttacaccccctgggatggataggacatctccagacaacagt
ccagtccatggccttttacgtcagccctccattacaacaggagccaacatccctattata
acagagctagtaaatgattcaaatgttcagttcttggaccaagatgatgatgatgatccc
gacacagaactgtacctcacgcagcccttcgcatgtggaaccgcatttgctgtcagcgtg
ctggactctctcatgagtgcaacatacttcaatgacaatatcctcacactgatacggaca
ttggtaacaggaggagccacaccagagctggaagcactgattgctgaggagaatgcattg
agaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcgagttgctcag
ttggctttgtatgatgggccatttgcagacctaggggacggaggttgttatggagatcta
ttttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcgattaagggat
gcacacctaagtactcccagccaatgcactaaacgttacgttatcacaaacccaccgtat
gaatttgagcttgtgccgacggacttgatcttctgtttgatgcaatttgaccacaacgct
ggccagtcccgagccagtctttctcattcctcccattcctcctactcttccagcaagaag
agctcctcagttcactccatcccgtcaacagcaaaccgaccgaaccgcaccaagaccagg
gattcccgggacaaacagaagtatgtgcaggaggatagactttga
DBGET
integrated database retrieval system
