Sylvia atricapilla (blackcap): 136364396
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Entry
136364396 CDS
T10263
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
sati03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136364396 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136364396 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136364396 (NUP153)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136364396 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
136364396
NCBI-ProteinID:
XP_066180414
LinkDB
All DBs
Position
1:complement(64082085..64125379)
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AA seq
1457 aa
AA seq
DB search
MASGGGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKRE
DKCVDMNESANEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTGLDSAVPHCQPSTSSALGIGTPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPAFNLSAFGSPSPSLGNT
SVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVTSS
TARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTNFQSRQNQMDSQHPPVQK
LVTPKPIFLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMIKESFPSEKPVKSSESNLS
YPKLDTPASNGLSSGGRMDSACGKMRRERERYCASRPGQKQQLVRDSQEMEQEKLPEVPL
PISTASLPTFNFSFPASSAESSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEV
LPPLSQMKFTFSVPVVKSSELSGSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPA
KFLKQGSVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQ
SDAHDPCLQNKTTDGKCVTCEAAKVSTVESTKQTVSVSPCVSKTTVPTAGTLGFEDKFKP
APNTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPVVTDSLVTVTSTSSSTGTTV
TLGFGDKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGF
LDLDKFKKPEGSWECEVCLVQNTAEATKCIACESAKPGTKAELKGFGTATVSTNAAMPSF
TFGVPSSSSESSQTLGSTGNFKFGEQSSFKFGIASESATSSSVTGGFKFPSGSGNFKFGV
SSSDSKSDDSKKESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFAPS
STSSIATNENKTGVGGFTFGTVAEKDAASPALSFKKSDEKKDETASAKGGFSFGNVESAP
ASQFVLGRAEEKQDSVTSAGPLAFGKKADNEELKAQPIFSSGTAEHTKEESTAKPVFNFS
FGKPSEKENEQAKAPFAFGAPTSTCDQGASFSFLSSSSSSTVVPTTSANSSSMFGSTLSS
SNPQPVPTPFVFGQPSNTVTSSVFGNPAESATTQSFGFSQENKPATTSSSTGSTLTPFLF
ASGDSSTNAANSGFTFGATTTSSSTGSSSSFLFGSGPPALAAGPAFGTSQPPTFGPSSGS
GQQSAPSFGSLSTTLFSAGSHPAPSAFGSVTSSTQPPVFGQQAAHQPTFGSGTPSTGSVF
RFGGSNTNFSFPNNPGVFTFGANPPAPAPPAPPSGTSGFSFNQQPAFTVGTNGKNVFSAS
GSSVAGRKIKTAVRRRK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggcggcggcggcggcaagatccggacccgacggcaccacctg
ggagccgcgaagccgccctacgcgaggggcaagcagcagctggggctccttagcagagtg
actgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaacaaaagggaa
gataaatgtgtagacatgaatgaatctgcaaatgaggaagagaatccagtaaactatcac
catgattatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatcagca
agaattaatttagaagagccatccacgagcaggtctgcgctgaacttctcggatgtgttg
acgaggccctcccttcaccggagccatttgaactgcaccgggttggattccgcagtcccg
cactgtcagccctccacatcttccgcgctcggcatcggcactcctgggctgtccctcgta
aaggaaataaaagattctacctctcagcatgatgatgataacatctcaacaaccagtgga
ttctcctctagagcatctgataaggatatcacagtttcaaaaaatacttcagcaccactg
ctctggtccccagaggctgaaagatctcattcgctctcacagcatcctgcatctagctct
aaaaaacccgcattcaatttatctgcttttggatctccctctccttcacttggaaacact
tctgtctttaagacaagacagcttggggattctccattttaccctggaaagacctcttat
ggtggtgcagctgcagcagcaaggcagacaaaagtgcagatttctgcttaccagccacca
atcaagagacaaatgaaagctaaacaagcgaatgtgcaatcctacggtgtgacaagttcc
acagcacggcgcatcttgcagacattggagaagatgtcaagccctttggcggatgctaaa
aggattccatcttctgtttctagtccgctgtcttctcctgtggacaggagtgtgctgaat
gtgactaacttccaatccagacaaaaccagatggattcgcaacatccacctgtccagaaa
cttgtgacgccaaagccaatcttcctgacagggagtcggatcacgtattttaaaccatct
ctgaaatcagctactaattccagaaaaattcaccaaagggtagatacagaccatcaagat
atgataaaggagagttttccctcagaaaagcctgtaaaatcatctgaaagcaatttgagc
taccccaagctggatacccctgcatccaacggtctgtcttcaggaggaaggatggatagt
gcctgtggcaagatgagaagggaaagggagcgatactgtgcatccagacctggacaaaaa
cagcaactcgtaagggactctcaggagatggagcaagaaaaactacctgaagtacccctg
cccatcagtactgcatcgctgccgacattcaacttcagtttccctgccagcagtgctgag
tcctcatcacccagcattgtttcaaaagcagtgatgaacaaggtacaaccagcaagtaat
gttggcagtcctacatttgtattttcatctccaattgtgaaatctaccgaggtggaagtg
ctacctccattgtctcagatgaagtttacatttagtgttcctgttgtaaagtcatcagag
ctttctggatccactgatacaccagtgacatccatccttagtccaggtagtgccactgta
aacagcaccagcaataagaaggaagaggaagaagaatatgatgggttctgcaaacctgcc
aagttcttaaagcaaggaagtgtgttagacattctaaaaagccctggctttatgtctggg
aaatcgccctcctgttcatctgcacagcctgttacaagcacagtggtctatacaaggcct
gcaataagtagtttttctgcaggtaaagacacctctaaacaagcctcttcgttctggcag
tctgacgcacacgacccatgtctgcagaacaaaaccacagatggcaaatgtgtaacatgt
gaagctgctaaagtgtccactgttgagagtacgaagcagaccgtcagtgtgagtccatgt
gtctccaagacaacggttcctacagcagggacactgggctttgaagacaaatttaaaccg
gcacccaacacgtgggattgtgatacctgtctagtccagaacaagcctgaagctacaaaa
tgtatagcctgtgagacaccaaagcctggaacaggagtgatgcctgctctgacaatgcca
gtggtcacagacagcttggtgacagtgacatccacctccagcagcactggcacaacagtc
actctgggatttggtgacaaattcaaacagccaaaaggctcttggaactgttcagtgtgc
cttctacaaaataaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccaggg
agttcagtgcctgtgaccagtagcagtgtttctgcattttctgcttcttctggaggtttt
ctggatttagacaaattcaagaagcccgaaggaagttgggaatgtgaggtctgcttggtc
caaaacacagcagaagccacaaaatgcatagcttgtgaaagtgcgaagccaggcaccaaa
gcagagctcaaaggttttggtactgctactgtgtctacaaatgctgcaatgccatcattt
acattcggtgtcccctcatcgtcctctgaatcttctcaaacattaggtagcacaggaaat
tttaaatttggggaacaaagtagctttaagttcggcattgcatccgaatctgcgacatcc
agcagtgtgactggaggatttaagtttccttctggttcagggaacttcaaatttggagtt
tcttcctcagactctaaatcagatgacagcaaaaaagaaagtaaaagtaatagttttacc
tttggacttccatctacaagcagtcaggctccttcaacatttcagtttggaacgacaagt
ctgggacagcaggaaaagaaagaggaaccagttttgggaggttttggttttgctccaagt
tctacttcttccatagctactaatgagaataaaactggagtcggcggcttcacttttgga
actgtggcagaaaaggatgcagcatcacctgctttgtcatttaagaagtcagatgagaaa
aaggatgaaactgcttcagcgaagggaggtttctcttttggtaatgtggaatctgcacct
gcctcacagtttgttttgggaagggcagaagagaagcaggactctgtcacttctgctggt
ccgttagcatttggaaagaaagctgacaatgaagagttaaaggcacagcctatcttttca
tctgggacagctgagcataccaaagaggagagcacagcaaaacctgtattcaattttagt
tttggtaaaccgtcggaaaaggaaaatgagcaggcaaaggcacctttcgcatttggggca
ccaaccagtacttgcgatcaaggagcatccttcagcttcttgagctccagttcctccagc
acagtggtacccaccacttcagccaacagcagcagcatgtttggcagcactctctcttcc
tcaaaccctcagccagttcccactccctttgtgtttggacaacccagcaacactgtgacc
agctctgtttttggcaaccctgcagaatctgcgacgactcagtcatttggcttctctcaa
gaaaacaaaccagcaaccacatcttccagcactggctcgactcttactccatttctcttt
gcttcaggagacagcagtaccaatgcagcaaattcaggatttacttttggagccacaact
acgtcaagttcaacaggctcatcatcttcgtttctgtttggctctgggcctccagcactt
gctgctggcccagcctttggcaccagccagccaccaacatttggcccaagctccggctcc
ggccagcaaagcgctccaagttttgggtcgctgtcgacaacgttgttttctgctggctct
caccctgctccttctgccttcgggtcggtcacaagcagcactcagccccctgtgttcggc
cagcaggcagcccatcagccaacttttggctctggtacacccagcactggttctgtattc
cggtttggaggcagtaatactaatttcagctttccaaataacccaggagtgttcactttt
ggtgcaaatcctcctgcaccagcacctcctgcaccgccttctggtacttcaggattttcg
ttcaaccagcaaccagcatttacagtggggactaatgggaaaaatgttttctctgcctct
ggatcttcagttgctggtcggaagataaagactgcagttagacgtagaaagtaa
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integrated database retrieval system
