Sylvia atricapilla (blackcap): 136364412
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Entry
136364412 CDS
T10263
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sati03009
]
136364412
03036 Chromosome and associated proteins [BR:
sati03036
]
136364412
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136364412
Ribosome biogenesis [BR:
sati03009
]
Eukaryotic type
Pre-60S particles
Helicases
136364412
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
136364412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
136364412
NCBI-ProteinID:
XP_066180433
LinkDB
All DBs
Position
8:33575632..33586950
Genome browser
AA seq
712 aa
AA seq
DB search
MPEATRCSTSSGAESGSDCSMDTEAGPESGRRRHKKEKKEKKSKRRDKFQRGKTQTDESE
ESDEERYAPKPKKSKSVSKQNGHTKEESLEKSRLSSFSSKSSRRSRQSSSSETSSESESE
SEQDQELTGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYSGKDVIAQART
GTGKTFSFAIPLIEKLQGESQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQVDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQVDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIE
YFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSY
AWRRLREVLGDDVDRKVNRMCFLKGKMGVCFDVPVADQKEIEARWEDSKHWRLCVATELP
ELVESIRGGGGGSGGGNGRSFSSSRNGRRGGSGRNRFRSRGQKRSFSRAFEH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccacccggtgcagcaccagcagcggggccgagtcgggctctgactgctcc
atggacaccgaggcgggcccggagagcggccgccggcggcacaagaaggagaaaaaggag
aagaaatctaaacgccgggacaagtttcagaggggaaaaactcagacagatgaaagcgag
gaatcggatgaggagcgttatgccccgaaacccaagaaatcaaagagtgtcagtaaacag
aacggtcatacgaaagaggaaagcctggagaagtcgagattgtcctcctttagcagcaaa
tcctcccgccgaagccgacagagtagttctagtgaaacgtcaagtgagagcgagagtgag
agtgagcaggatcaggagttgactggagaacagaaagagggtgctttctccaatttttct
atttccaaagaaactgtccagcttcttcaagctcgaggagtgacgtacctgttccctgtg
caagtgaagaccttcaacccagtgtattctggcaaagatgtcattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgagaagcttcagggagagtca
caggaaagaagaagaggccgtccaccaaaggttctagttctgtgtccaacaagagaactg
gcaaatcaggttgccaaagatttcaaggacatcacaaggaagctgacagtagcttgtttt
tatggaggaactccctataatggacaagttgacctcatgagaagtggcattgacattttg
gttgggacacctggtcgaatcaaagaccacctgcagaatggcaagctggaccttaccaag
gtgaaacacgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaatccccagaccctg
ctgttttctgcaacttgcccacactgggtgtatgatgtggctaagaaatacatgaagtct
agatatgaacaggttgaccttattgggaaaagaactcagaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcaa
gtctacagtggcagccatgggaggaccattgtcttctgtgagaccaaaaaggaggcaaat
gaactggctctgaatgcttcaatcaaacaggattgccagtcattgcatggtgacattcct
cagaagcaaagagagatcacactgaagggttttagaaacggttcatttaaagttctggtt
gcaaccaatgtagctgcccgtggtttagatatcccagaagttgacctggttgtacaaagc
tcaccaccaaaggatgtggagtcctatatccatcgttctgggcgcacaggtcgagctggg
cggactgggatctgtatctgtttctatcagcgaaaggaagaatatcagttaagacacgtg
gaacaaaaagcgggcattacattcaagcgcgttggtgttcctactgcaacagacataata
aaggcttccagcaaagatgccatgaggtgcctggattctgttcctcagactgctattgag
tatttcagagaatctgctcagttgctaataaaagaaaagggaccagttaatgctctggct
gcagctctggcccatatttcgggtgctacttccattgaacagcgctcactgctgaactca
gatgcgggatttgttacaatgatactacgctgctctgaagagataaacaacatgagctat
gcctggagaagactgcgagaagtgttgggtgatgatgtcgatcggaaggtgaacagaatg
tgtttcctcaagggaaaaatgggtgtgtgctttgatgttcctgtggcagaccaaaaagaa
atagaggcaaggtgggaagattcaaaacattggcgtttgtgtgtggcaactgaattacca
gagctggtggaatccatacgaggaggaggaggggggagtggtggaggcaatggccgaagc
ttctcaagctccaggaacggtcggcgtggtggctctggtagaaacagattcaggagcaga
ggccagaaacgaagtttcagcagagcatttgaacattaa
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