Sylvia atricapilla (blackcap): 136364551
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Entry
136364551 CDS
T10263
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136364551 (CDHR1)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Cadherin related
136364551 (CDHR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
136364551
NCBI-ProteinID:
XP_066180603
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All DBs
Position
8:26588311..26630636
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AA seq
865 aa
AA seq
DB search
MKHVRHFTPSLFLSLVHVCLVQANYAPYFFDNGARSTNGNMALLSLSEDTPVGTHVYTLN
GTDPEGDPVTYDLTYEAGSRRYFSVDKNLGNVTLIEELDREKEDEIEVIVSISDGLSTVS
EKVRILVMDANDESPEFINTPYIVQVPENTPSSSSIFKIEAIDKDTGSGGSITYFLQNIH
ANKFTIDRHSGVLRIKPGVTLDYEKSRTHFVVVVAKDGGGKLRGDNKVFSATTTVTINVE
DVQDTPPMFIGTPYYGYVYEDTLAGSEVLTVVALDGDRGKPNSIHYCIVNGSEGSFEISN
TTGAISVIKSPNQLKKEVYELKVKASEVSQEGDLSEHTFAMVTIRVVDLNNHPPTFYGEN
GPQNRFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEA
QVTIIVENSAAIDYESFKVLTFKLLAIEVNTPEKFSSTADVVIRLLDTNDNVPKFSSDYY
IARIPENSPGGSNVVAVTATDPDSGLWGEIKYSIYGTGADLFLIHPSTGIIYTQPWAVLD
AEVNSKYNFYVKAEDTDGKYSLAEVFITVLDVNDHSPEFNENIQEKTMIIGSPVKIEAID
QDAEEPNNIVDYSIMQADPANVFDIDQSTGEIKLKSYIRSLDIIHNITNNKDCIWSLVVQ
AKDRGSPSFSTTAVLKIDITEETLHKGPMAAFLMQTKDNPMKALGVLAGVMGIMVLITIM
ISTAMFWRNKRSNKVMPVRRIIKKRQMPPSRTVRMEWLKFKRPSNAAEKFVVEEDAKSLH
NENSNNNVQVVPVPPAAPLPPPPPALAPRGDAPGWRVPTVSGSLTPKHVIKPLKKKGHSS
THNALVSELKMRFEKRNAAYGEPHI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgtaaggcatttcaccccctccttatttctcagtttggtgcatgtttgcctg
gttcaggcaaattatgccccctatttctttgataatggagccagaagcacaaatgggaac
atggcacttctcagcctttcggaggacacgcctgttggtacccatgtgtacactctgaat
ggaactgatccagaaggagatcccgtgacctatgacctgacctatgaagctggatcaagg
cgctacttttctgttgacaagaaccttggaaatgttactttgatcgaggagcttgacaga
gagaaggaagatgagattgaggttattgtcagtatttcagatggcctgagtacagtttct
gaaaaagtcaggattcttgtaatggatgccaatgatgagagcccagagttcatcaataca
ccttacatagtccaagtcccagagaacactccctccagcagcagtatctttaagattgag
gcaatagacaaggacacgggttctggaggaagtatcacctacttcttgcagaacatccat
gctaataagtttaccatagaccgccacagtggtgtcctgcgcatcaaaccaggggtcacc
ctggactacgagaaatcaaggacacattttgttgttgttgtagccaaggatggaggtggg
aagctcaggggagacaacaaagtgttttcagccacaacaacagttaccatcaatgtggag
gatgttcaggacactcctcccatgttcatcgggactccctactatggatatgtctatgag
gacacgctcgcaggctctgaggtccttactgttgttgctcttgatggagacagaggaaag
cctaacagtattcattactgcatcgtgaatggaagtgaaggttcatttgaaatcagcaac
acaactggagccatttctgtgataaaaagcccaaatcagctcaagaaagaagtgtatgaa
ctaaaagttaaggcatcagaagtcagtcaggaaggtgacctctcggagcacacatttgcc
atggtgaccatacgggtagtcgacctcaacaaccatccgccaacgttctatggagaaaat
ggtccccagaacaggtttgagctgaccatgtacgagcatcccccagagggtgaaatctta
aggggattgaagattacagtcaatgattcagatcagggagccaatgctaaattcaacctc
cgtcttgttggacctggtggcatcttccgagtggttcctcagactgtcctgaacgaggct
caggttacaataatagtggaaaattctgctgctattgactatgaaagcttcaaggtgtta
accttcaagcttcttgcaatagaggtgaacacaccagagaaattcagctcgacggctgac
gtcgtgattcgcttgctggataccaatgacaatgtcccgaagttctcctctgactactac
atcgccaggatccccgagaactccccagggggctccaatgtagttgctgtcacagctaca
gatccagattcagggctttggggagaaatcaagtattccatctatggaacaggagcagat
ctgttcctaatccacccatcaacaggtataatttacacccagccctgggctgtactggat
gctgaagtgaactccaagtataatttctacgtgaaagcagaggacacagatgggaaatac
agcttggctgaagtgttcatcaccgtgctagatgtcaatgaccactctccagagttcaat
gagaacatccaggagaagacaatgatcattgggtcaccggtgaagatagaggctatagac
caagatgcagaagaacccaacaacattgtggattattccatcatgcaagcagatccagcc
aatgtgtttgacatagaccaaagcactggggaaatcaagctgaaatcctatatccggtct
ctggacatcatccacaacatcacaaacaacaaggactgcatatggtcattggtggtccag
gccaaagaccgaggctccccatccttcagtaccacagcagttctcaagattgatatcaca
gaagagactcttcacaaagggcctatggccgcctttttgatgcaaactaaagataacccc
atgaaagccttaggagtgctagctggtgtcatgggcataatggtgctgataactatcatg
atctctactgccatgttctggcgcaacaagcggtccaacaaagtcatgccggtgagacgg
atcataaaaaagagacagatgccgccatcccggacagtcaggatggagtggctgaagttc
aagaggcccagcaacgccgcagagaagtttgttgtcgaggaggacgccaagagcctgcac
aatgagaacagcaacaacaacgtccaggttgtccccgtgccgccggcagcccccctgccg
ccgccacccccggccctggctccccggggcgatgccccagggtggcgggtgccaaccgtg
tccggctccctcactcccaagcacgtcatcaagccactaaagaagaaaggtcacagcagc
acccacaacgccctcgtgtcagagctcaaaatgaggtttgagaagaggaacgcagcttac
ggggagccccacatctaa
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