Sylvia atricapilla (blackcap): 136364693
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Entry
136364693 CDS
T10263
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136364693 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136364693 (TPR)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136364693 (TPR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
136364693
NCBI-ProteinID:
XP_066180782
LinkDB
All DBs
Position
9:complement(5770117..5804582)
Genome browser
AA seq
2370 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKVLNEKNKELEAAQDRNTALQSQLSREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTEKAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLQNQNTWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQASMEERFHNELNAHIKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAEVEESKAAMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQICVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAKEKEEQETTSSKISELQSQLDEAVNELQQLRESRQHQ
LQLVESIIRQRDMFRILLTQTTGAIIPLQASGMLPEEICLTSTPKRPNLPQSMATPAPVS
MNESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETSRHMSTKELLKNAQ
KESTMLKQQLNNTEAQLTSQSSQRPPGKGQPSTSEDVDDLVSRLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRTTVEARLKESSEYQAHLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLAEREANAKRVQQMSEETGR
LKAEVARTNASLTTSQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAEASTLPLTEPQEDQVSAQEVQELKDTLSQAEVKTKNLETQ
VESLQKTITEKETEVRNLQEQIMQLQAELARFHQDLQEKTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTNTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYAAMEDGDENSQSI
PIDLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDDEDT
GMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQNSGE
GSTSAAESTFPHESLREQQPSSASERQGPRPPQSPRRPPHPLPPRLTIHAPPQELGPPVQ
RIQMTRRQSVGRGLQLTPGIGGMSLFFQQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIH
SPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTT
PLQVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGAGDDADEVFAEAESEG
ITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQPPTLR
TGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctcctggagcgggccgagctcgccaagctgccccgcgcc
gtgcagggcaagttggagcgctttctgggcgaccagcagggcgagattgacggactgcga
gcccgtcatgagcgcttcaaggtggacagcgagcaacagtactttgaagtggaaaagcga
ctggctcagagtcaggaaagacttgtaaacgagacccaggaatgtcaaactctgcgggag
gagcttaaaaagcttcatgagcagctgaaggtgctcaatgagaagaacaaggagctggag
gctgcccaggaccggaacacggcccttcagagccagttaagtcgagagaaggaagaactg
gaagctgagaagagagacttggtccgaacaactgaaaggagatctcaggaagttgaacat
ttaaatgaggatgttaaacgcttaaatgaaaagctcacagaggcaaacacagaaaaggca
aaacttcagctgaagttggatgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagagaaagagctgctgcagaaccagaacacatggctgaatgctgag
ctgaaagccaaaacagatgaactgctccatactgccagggagaaaggcaatgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggaacaggtg
aacagcttgaaacagtcaaatgaaaacctccagaagcatgtcgaagaacttttgaataaa
ctgaaggaggcaaaagagcagcaggcaagcatggaagagagattccacaatgaactgaat
gcccacataaaattatccaacttgtataagagcgctgctgatgactcagaggcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctgaaggaagcaggtgaagct
aataaagcagcccaggagcatttggctgaggtggaggagtcaaaagctgccatggaaaag
gagctgagagagaagatcagtaagctggagaaggagctggagaatgccaacgatttactg
tcagctacaaagcgcaaaggagccatcctgtccgaggaggagctggcagccatgtctccc
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgagctgtacaat
gcctatgtagaaactcaggatcagttacatatggagaagctggagaataagagaatcaat
aaatatttggatgaaatagttcaggaagtagaagccaaagctccaatcttaaaacgtcag
cgtgaagaatttgaacgttcccaaaaagctgttgcgagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcctgcaggacagtgccgaccaagccaacaaacacgcctcc
ttctttgagagggagagccagaggctggaagtgcgagtgaaggatctctctcagcagatc
tgtgtgctgttaatggaactggaggaagccagagggaaccatgtgatccgtgatgaagca
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtctcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaaaagaaaaagaggagcaagaaacaacatcatctaagatctctgagctccag
agccagctggatgaggctgtcaatgagctacagcagctgcgggagtcacggcagcaccag
ctgcagctcgtggagtccatcatccgccagcgggacatgttccgcatcctgctcacccag
accacgggggccatcattcctctgcaagcttcaggtatgttaccagaggagatctgtctt
acatctactccaaagcgcccgaatttacctcagtccatggcaactcctgctccagtgtcc
atgaatgagtctgtggaaactgtggaggccaaggctgctcttaagcagttgcaggaagtt
tttgagaactataaaaaagaaaaggcagagaatgacaagcttctgaatgaacagaatgaa
aagcttcaggagcaggtcacagacttgaggtcacaaaatgccaagatatccacacagctg
gaatttgcctccaaacggtacgagatgctgcaggataacgtggaaggctatcgccgggaa
atcacctccctgcacgagagaacccagaagctcacagccaccactcagaagcaggagcag
atcattaacaccatgactcaggacctgaggggagctaatgaaaagctggcagtggcagag
gtaagagcagagaacttgaaaaaagagaaggatatcctgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggttgaacaaagaggacagaacttgctgctcaccaat
ttgagaacaatacagggaatactcgagagatctgagacagaaacaaagcagagactcaat
aatcagatagaaaagctggagcgtgagatatctcagctgaagaagaaactggaaagtgag
gtggaacaaagacattcccttaccaagaatcaagaggttcatatcctggacctgaagagg
cagctggagacggagaccagccgtcacatgagcacaaaggagctcctgaagaacgcccag
aaggagagcaccatgctgaaacagcagctgaacaacactgaggctcagctcacatcccag
tcctcacaaaggcctccagggaaaggtcagcctagtacaagtgaagatgtggatgatctt
gtaagtcggctgagacaagctgaggaacaagtcaatgacctgagagagaggctcaagact
agttccagtaatgtggagcagtacagggccatggttcttagtctggaggaatccctcaat
aaggaaaaacaagtgacagaggaagttcgtacaacagttgaagctcgtctgaaggagtct
tcagagtaccaggcacatctggaaaagaagttgatggagtcagaaaaagagaaacaagaa
ctgcaagaggagaagcgtaaagctgtggagaacatggaacaacagctttcagaactgaag
aagagtctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ctgaataatgagcaacaggccaggagggactgccaggagcaagcaatgatggcttctgaa
gctcagaacaaatatgagcgggaattgatgcttcatgctgctgatgtggaggccctgcag
gccatcaaagagcaagtcgccaagaacgcagcagtgaggcagcagctggaggaggctgct
cagaaagcagagtccgagctcttggaatccaaagcctcctgggaagagagagagagaatg
atcaaggatgaagcttcaaaacttgcatcccgctgtgaggatctagaaaaacaaaatcga
ttattacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctcttagtgaggaaggcaaatcccaggaacaaatcttg
gaaattcttcggtttatccgtcgggagaaggagatcgcggagacgaggttcgaggtggcg
caggtggagagcctgcggtaccgccagagagtggagcacctggagagggagctccaggag
ctgcaggacagcctcaacgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
cagcatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaagagaaggagaggctggagcaagagctacagcagatacaagcaaaggta
cgcaagctcgaggcagacatcctgcccctgcaagagtcgaatgctgagctcagtgagaag
agtgggatgctgcaggcagagaaaaagctcttggaagaggatgttaaacgctggaaagcc
cggactcagcacttactgagccagcagaaggacaccgatctcgaagagtatcgaaaactg
ctcgctgagagggaggcaaatgccaagcgtgtccaacagatgagtgaagaaacaggcagg
cttaaagcagaagttgccagaactaatgcatccttgactacaagccagaatcttgttcag
agcctgaaggatgaagtaactaaaataagaacagaaaaggacactttgcagaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatc
ggtcgcaggtacaagactcagtatgaggagctgaaagcacagcatgataagatggttgct
gaagcgtcaactctgcctttgacagaaccacaagaagaccaagtttctgcccaggaagtc
caagagctaaaagacactctcagtcaagctgaagtgaagacaaagaatttggagactcag
gttgaaagcttacaaaagacaataacagaaaaggaaactgaagttagaaatctccaggag
cagataatgcaactacaggcagaactggcccgtttccatcaagatctacaagagaagact
acacaggaagagcagctcaggcaacagatcactgagaaggaggagaaaactaggaagacc
ttgcttgcagccaagcagaaaattgcacagttagctggtacaaaagagcagctcacaaag
gaaaacgaggagtggaagcagaagagcagctccctggaggagcagaagacggagctggag
gtgcggatgagcgcgctgaagtcgcagtacgagggccggatctgccgcctggagagggag
ctccgggagcagcaggagcggcaccacgagcagcgggatgagcccccagagtccacaaac
aaggtcccagaacagcagaggcaaatctcactcaagtctactccagcttcaggtgaaaga
ggaattgccagcacttcagatcccccaacagcaaacattaaaccaactcctgttgtgtca
acccccagtaaagtgactgctgctgcaatagctgggaataaatctactccaagagccagc
atccgtccaatggtgactcctgccacagtcaccaatcccaccaatacccccacagccaca
gttatgccaacaacacaggtggagactcaggaagccatgcagtcggaaggacccgtggag
cacgtcccggtgttcgggagcgccagcggctccgtgcgctccaccagccccaacgtgcag
acatccctgccccagcccatcctgactgtgcagcagcagacacaggccactgcctttgtg
cagcccacacagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagattgagaggccctccacctccacagccgtgttt
ggcacagtttcagccacgcccagttcctcactgtctaaacggtcccgagaggaagaggag
gacaacactgtggagaactcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagcagaagagagc
actgatggagaggtggaggcacaaacatacaatcaagactcacaagattccattggagaa
ggggtgacacagggggagtacgcggccatggaggacggcgacgagaattcccagtctatc
ccaatagatcttcagtcagaccaacaaaacacttcttcatctcaggatggccagtccaag
agagatgatgtgattgtaattgacagtgatgatgaagatgacgatgatgaagaaaatgaa
ggggagcaggaagattatgatgatgaggaagaggaagatgaggatgatgatgaggacaca
gggatgggagatgagggtgatgacagcaatgaaggaactggtagtgctgatggtaatgat
ggatatgaagcagacgatgctgagggtgctgatggtacagatcctggaacagagactgaa
gagagcatgggaggagctgaaagcaaccagagggcagcagattcccaaaacagtggagaa
gggagcacaagtgctgcagagtccacgtttccccacgagagcctgagggagcagcagccg
tcgtcggcatctgagcgccagggcccgcggcccccgcagtccccacggagacccccacac
cctctgcccccacggctcaccatccacgcccctccccaggaactggggcccccagtgcag
agaatccagatgactcgaaggcagtcggtggggcgaggacttcagctgacccctgggata
ggtggaatgtctctttttttccagcagcagcacttctttgatgatgaggacaggacagtt
ccaagcacaccaactcttgtagttccacatcgtacagatggatttgcagaagcgattcat
tccccccaggtagctggagttcctcggttcagatttggaccccctgaagatatgccacaa
accagctccagtcactctgatcttgggcagctggcatcacaaggaggtttagggatgtat
gaaacgcctctattccttgcccacgaggaggaatcggggggtcgtagtgtccccacaaca
ccattacaagtggcagcaccggtgacggtgttcacggagagcgcctcggccgacgcctcg
gagcacgcgtcgcagtccgtgcccatggtcaccacctccacgggcagcctgtccaccacc
accgagcccggcgccggcgacgacgccgacgaggtcttcgcagaggcagagtctgagggc
attacttcagaagcaggtctagaaattgatagccagcaagaagaagaatctgttcaagcg
tctgatgagtcagatcttccctcaactagtcaggatcctccttcaagttcatctgcagac
acgagcagcactcagcccaagtccctgcgccgtgtccggctgcagcccccgacgctgagg
acgggcgtgcgtggccggcagttcaacaggcagaggggtgtaactcatgccatgggaggc
agaggaggactgaacagaggaaacattagttaa
DBGET
integrated database retrieval system
