Sylvia atricapilla (blackcap): 136364707
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Entry
136364707 CDS
T10263
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04115
p53 signaling pathway
sati04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136364707 (COP1)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136364707 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136364707 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136364707
NCBI-ProteinID:
XP_066180806
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Position
9:complement(8018375..8142558)
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AA seq
704 aa
AA seq
DB search
MSGSRPPHPAVPPAATPASSSSSSSSSSSSSAAMAPGSSSSGGAAARPVLVAAAVSGSGP
GLPRLAAAAARPGGSSAAPGGGGRKRPLLTPLCNGLINSYEDKSNDFVCPICFDMIEEAY
MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRSEEKRLKL
DHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF
LKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIID
STEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRTTS
QLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKV
YEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSK
VYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSS
RYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNV
GKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVL
DKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagccgcccgccgcaccccgctgtgccgcccgccgccacaccggcctcctct
tcctcctcttcctcctcatcctcctcctcttcggcggccatggcccccggctcgtcctcc
tcgggcggcgcggcggcgcggcccgtgctggtggcggccgccgtgtcggggtcgggcccg
gggctgccccggctggcggcggcggcggcgcggcccggcggctcctccgcggcgccgggg
ggcggcggcaggaagaggccgctgctcaccccgctctgcaacgggctcattaactcctac
gaggacaagagcaacgacttcgtgtgccccatctgttttgatatgattgaagaagcctac
atgacgaaatgtggacacagcttctgctataaatgtattcaccagagcctggaggacaat
aacagatgtcccaaatgcaactatgttgtggacaacattgatcatctttatcccaacttc
ttagttaatgaattaattcttaaacagaagcaaagatctgaggagaaaagactcaaactg
gaccattcagtgagtagcaccaatggccacaggtggcagataattcaagatttgttggga
actgatcaagacaatcttgacttagccaatgtcaacctgatgctggagctgctggtgcaa
aagaagaagcagttggaagcagaatcccatgctgcccaattgcagatccttatggaattt
cttaaagtagccaggagaaacaaacgagagcaattggagcagatccagaaggagctaagt
gttctggaagaagatattaaacgggtagaggagatgagtggcctgtactccccggtcagt
gaggacagcacagtgccacagtttgaggctccctcaccttcacacagtagtattatcgac
tccaccgagtatagccagcctccaggcttcagtggcagttctcagaccaaaaagcagccg
tggtacaacagcacgctggcctcacgacgcaagcgcctcacagctcattttgaggacctc
gagcagtgctatttttccaccaggatgacacgtgtctcagatgacagcagaaccaccagc
cagctggatgagtttcaggagtgtctatccaagttcacacgctacaattcagtccggccg
ctggcaacgctgtcctacgccagtgacctctacaatggctccagcatagtatccagtatt
gagtttgaccgagactgtgactactttgccatcgctggagtgacaaagaagattaaagtc
tatgagtatggtacagtcattcaggatgcagtggatattcactaccctgagaatgaaatg
acctgtaattccaaaatcagctgtatcagctggagtagttaccacaagaacctgctagcc
agcagtgactatgaaggcaccgtcatcctttgggatggattcacaggacagagatccaag
gtctatcaggagcatgagaaaaggtgctggagtgttgactttaacttgatggaccctaag
ctattggcttcaggctctgatgatgccaaagtgaaactgtggtctaccaacttggacaac
tcagttgcaagcattgaggccaaggccaacgtgtgttgtgtcaaattcagcccatcttct
aggtatcacctagcttttggctgtgcagatcactgtgttcactactacgaccttcgcaac
actaagcagcccatcatggtgttcaaagggcaccgcaaggcagtctcctatgcaaaattc
gtcagcggggaggaaatcgtctctgcgtcaacagacagccagctgaagctgtggaacgta
gggaagcctcactgcttgcgctccttcaagggtcacatcaatgagaagaacttcgtaggg
ctggcgtccaatggagactacattgcctgtggaagtgaaaataattccctttacttatac
tataagggcctctcaaagacactgctgacgttcaagtttgatacagtcaaaagtgtcctg
gacaaggaccggaaagaagacgacacaaatgagtttgtgagcgctgtgtgctggagggca
cttccagatggggagtccaacgtgcttattgctgctaacagtcagggtacaattaaggta
ctggagctggtatga
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