Sylvia atricapilla (blackcap): 136364872
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Entry
136364872 CDS
T10263
Symbol
RNF220
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF220
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136364872 (RNF220)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136364872 (RNF220)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136364872 (RNF220)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
Rad50_zn_hook
Pox_A_type_inc
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
136364872
NCBI-ProteinID:
XP_066181091
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Position
9:complement(14349782..14569332)
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AA seq
615 aa
AA seq
DB search
MDLHRAAFKMENSPYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSADKDVHI
PFTNGSYTFASMYHRQGGVPGAFANRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTDSPHLRFSDTDGKEYEFGTQLPSSSPGSLKVD
DTGKKIFAVSGLISDRETSSSPEDRSDRYRSDNQRGPQASATATHRMILTLPLCKKKATL
FDSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKSSILKDAMAAGTPKSILLSASI
KREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSR
PLSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEG
GFRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALR
GAVLNGGTPSTRITPEFSKWASDEMPSTSNGESSKQESVQKTCKNSDIESEITEDSAVTT
FEALKARVRELERQLSRGDRYKCLICMDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQ
CNTITSPGDLRRIYL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggacttacaccgggcagcattcaagatggaaaactcaccctatctccccaaccccctg
gcctccccagcactgatggttctcgcctccactgccgaagccagtcgtgatgcttccatt
ccctgccagcagccgaggccttttggggtccccgtgtcagcagataaggacgtgcacatt
ccctttaccaatggctcatatacttttgcctccatgtatcaccgccaaggcggggtgccg
ggagcatttgcaaaccgtgactttcctccatccttgcttcacctccatcctcagtttgca
ccccccaacctggactgcaccccaatcagtatgttgaaccacagcggcgtcggggccttc
cgcccctttgcatccactgaagaccgggagagctaccagtccgcctttacgccggccaag
cgcctgaaaaactgccatgacactgactcaccccatctgcgcttctcggacactgatggg
aaggagtacgagtttggcacccagctcccctccagctcccctggctccctcaaagttgat
gatacagggaagaagatatttgctgtttctggcctcatttccgaccgtgagacctcatcc
agtcctgaagaccgaagtgacagatatagaagcgacaaccaaagagggccccaggcgtct
gcaactgccactcatcgtatgattttaactctccccctctgcaaaaagaaagcaactttg
tttgacagccaggctccgatctgccccatctgccaggtccttcttcgccccggggagttg
caggagcacatggagcaggagctggagaagctcacgcagctgaacatcagcaagagctcc
atcctgaaggatgccatggcagcaggcacccccaagtcaattttgttgtcagcctcaatc
aagagggaaggagattctccgacagcatcaccccactcctcagatgacatccatcactca
gacagataccagaccttcctgcgggtgcgagcgaaccggcagacccggctgaacgctcgg
attggaaaaatgaaacggaggaagcaagacgaagggcaggtatgtcccctctgcagccga
cctctgtcaggatccgaggaggagatgagtaggcatgtggaacaatgccttgcaaagaga
gaaggttcatgcatgactgaggatgactctgtggacatcgagaacgagaatggcaaccgc
tttgaagagtacgagtggtgcggacagaagaggatacgggctacgactctcctggaggga
ggatttcgaggttctgggtttatcatgtgcagcgggaaggagaatccagacagtgacgca
gacctggatgtggatggagatgacacactcgaatacgggaaaccacagtacacagaggca
gacattatcccttgcactggagaagagccaggtgaagccaaagaaagggaggcgctccga
ggtgctgttttaaatggtggcacaccaagtactcgaataacaccagagttttctaaatgg
gccagtgatgaaatgccctcaacaagtaatggtgaaagcagtaaacaggagagcgtgcag
aagacctgtaagaacagtgacattgaaagtgaaattacagaagactctgcagtgacaaca
tttgaagcgttaaaggctcgtgtccgtgagttagaaaggcagctttcccgtggggaccgc
tataaatgtctcatttgcatggactcctacacaatgcccctgacttctattcagtgctgg
catgtgcactgtgaagaatgctggctgcggactctgggtgccaagaagctctgtcctcag
tgtaacaccatcacatctcctggagaccttcggcgcatctacttatga
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