Sylvia atricapilla (blackcap): 136364921
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Entry
136364921 CDS
T10263
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136364921 (FUBP1)
03041 Spliceosome [BR:
sati03041
]
136364921 (FUBP1)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
136364921 (FUBP1)
Spliceosome [BR:
sati03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
136364921 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
136364921
NCBI-ProteinID:
XP_066181197
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All DBs
Position
9:complement(16411957..16445393)
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AA seq
661 aa
AA seq
DB search
MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQI
SRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGP
GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYK
VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN
DAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR
GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPN
MKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMG
PYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYA
HYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPAG
APPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKKQQTFNH
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcctgggggaggcggtggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcaaagggctaggcagattgcg
gcgaaaattggaggagatgctggcacagcaatgaattcaaacgactacggttatggaggg
cagaaaagacctctggaggatggagatcaaccagatgctaagaaagttgctccccagaat
gactcttttggaaatcagctaccaccgatgcatcagcagcaaaggtctgtgatgacagag
gagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcagatc
tcacgcatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggcctg
cctgaaagatcatgtatgctaactggaacaccagagtctgttcagtcagcaaaaagatta
cttgatcagatagttgaaaagggaagacctgcacctgggtttcatcatggtgatggacct
ggaaatgctgtccaagaaattatgattccagcaagtaaagcaggattagttattgggaaa
ggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgattcaa
gatggtccacagaacactggtgcagacaaaccccttaggataactggagacccttataag
gttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttagagag
gtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaatacca
cgatttgctgtaggtattgtgattggaagaaatggagagatgattaaaaagatccagaat
gatgctggtgttaggatccagtttaagccggatgatggaacaactccagatagaatagcc
cagatcacagggcctcctgacagatgtcagcatgctgcagaaattattacagatctcctt
cggagtgttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggtaga
ggccaaggcaactggaacatgggacctcctggaggattacaggagttcaattttattgtc
cctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtataagc
caacagtctggtgctagaatagaacttcaaagaaatcctccacctaatgcagatccaaac
atgaagatgtttaccatccgtggaacaccccagcaaatagattatgcacgacaacttata
gaggaaaagattggaggtccagtgaatccattgggtccgcctgttcctcatggtccccat
ggcgttgttcccggcccacatggacctcctggaccaccaggtcctggtgctcccatggga
ccatataatccagctccttataacccaggccctcctggtcctgcacctcatggtcctcca
gctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaaccca
ccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattatgct
cactattatcagcagcaagcacagccaccacctgcagcccctcctggtggaccagctaca
acccaaactaatggacaaggagatcagccaaatccagcaccagcagggcaggttgactat
accaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgccccagccggg
gctcctccgggcggccagccagattacagcgcggcgtgggctgagtactacaggcagcag
gcagcgtactatgctcagactagtccacagggaatgccacagcatcctccagcaccacag
tgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacatttaatcat
cactga
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