Sylvia atricapilla (blackcap): 136364989
Help
Entry
136364989 CDS
T10263
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136364989 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sati02000
]
136364989 (ABCA4)
Transporters [BR:
sati02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
136364989 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
SRP54
DUF4162
Motif
Other DBs
NCBI-GeneID:
136364989
NCBI-ProteinID:
XP_066181324
LinkDB
All DBs
Position
9:complement(21597250..21661588)
Genome browser
AA seq
2333 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLLLFLVLVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTNGEGPGVVSNYKNSILARVYKDAQELLLEAPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLADFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSETLLDRFIIFSSRRGLPSVRKAMCALSQDSLQRV
EDALYANVDFFKLFRLLPTVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLRVL
QPFVQDGGPDSLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
IYDNTTTPFCNTLIQNLESNPLTKIAWSAVKPLLMGKILFVPDSPSVREIVKNANSTFEE
LERLQLLTKAWEEVGPQLWNFFQNSLQMNMIRDSLKHPTVRDFLNSQMGAEGFTAEHIIN
FLHNGSSRSREKGMVDFDWRNIFGAVDQVLRLLSQYLECLTLDKFEGYLDETQLTHQALY
LLEENKLWAAVVFPDLEPTTSNLPPHLTYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTSTEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMIVKSIVLEKEMRLKEAMKNRGITNGMVWCTWFLDSFSMMAVSTFLLTALIM
HGQVLRYSNPLLFFLFLLTFTTATIMQCFLFTTFFSKANLAAACSGVIYFTLYLPHIVCF
VWQDRLTVHLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMLFDAFLYGILAWYLDNVFPGAYGLPQPWYFPVLESYWLGSRSPEAEKTATADKKIPE
SEGCVDQKTMEREKNESNTNKSEEPEKTEEKSDSQGKKDGKNKQCKHKREKEPDEQGKPK
TDVQDKDEININTFFEPEPTGLIPGVCIQDLVKIFANRPKPAVDGINITFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLIGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSREEAEQELEIMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKVFCSGS
PVFLKNCFGSGFYLTLVRKMRTTKMGRAASFCSCGSQCSCSCSSCVHRSEEEAPELELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKATAEADPEMQKTGDTQENGSALGKTPTENKPAEQTVLKTTDTSRMAVG
RAGDRNEGKASRQYKGFQLVHQQIKALLIKRFHHASRSYKDFLAQVVLPASFVLLSLVLT
VIIPPFGEYPALILHPWIYGQQFTFFSNERPGNEQMVSLTHAFLNKPGFGIRCMKNQPLL
NYPCNNMPTAWNTPAVHPNLSSLLLSQEWTPENPSPSCKCSTHKKLTMLPECPAGAGGLP
PPQRVQRSTEILQDLTRRNVSDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLH
VSGDQIVNFLSDLGRMMNVTGGQTSLAAAKEIPNFLKYMETEDNIKVWFNNKGWHAMVSF
LNVANNAILRANLRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQEHVTKAKHLQFVSGVSPLTYWLTNFMWDLVNYALSAGMVVAIFAGFN
KKAYTSPTNLPVFIALLLLYGWAVIPMMYPASSFFSIPSTAYVALSCINLFVGINSSAIT
FILELFENNPSLLKFNKTLKNVLLVLPHFCLGRGLIDLAMSQAVTEVYARFGEEHVSDPF
QWDFVGKNLVAMALQGVVFFFLNLFMQHRFFSTRWFAETAMSPIINEDEDVAEERKRIMN
GGNKTDILQLQELTKIYAGRRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAVVAGNSILTHIRNVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLW
DSIVGVLRDRRAVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLK
IKAPKSGLPPDPAPAEKFIRINFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREARVSPALHQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttttaggcaagtcagacttctactctggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttgtatggcctctgttattgtttcttgtacttgtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaacactgccatggttacacggcatcttctgtaacatgaacaacccc
tgtttccgcagcccaaccaacggagagggtccaggtgtagtgtccaactacaaaaattcc
atccttgcgagggtatataaagatgctcaggaacttttactggaagcccctgaaatccat
gaccttggaagaatctgggaagaactgatcataatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcgcagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctagcttgactctg
aaggacattgcttgcagtgagacgctcctggaccgcttcattatcttcagcagccgaaga
ggtctcccttctgtacgcaaggccatgtgtgccctgtcccaggacagtctgcaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcggctgcttcccactgtg
ctggacagaaactcaccaggtgctgacctgaaggcctggggaagggtactgtctaatgtc
tcccaagcagtgcaaaagctggccaggaagccaagcgttcaggaccttttgagggttctg
caaccatttgtacaagatggagggccagactccttaggccacttggtgagttccctgtcg
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
atttatgataatacaaccacaccgttttgtaatacattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaattctcttt
gttcctgattcaccttctgtacgggaaatcgtaaaaaatgcaaactccacttttgaggaa
cttgaacgcctccaactgttgaccaaagcttgggaggaagtaggacctcagctgtggaac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaaacaccctacagtg
agggacttcctgaacagccagatgggtgcagaaggcttcactgcagaacatatcatcaac
tttctccacaacggatcttcaagaagccgggagaagggaatggtggactttgactggagg
aacatcttcggtgctgtagaccaagttctgcgtttgctcagtcagtatttggagtgtttg
accttggataaatttgaaggttatcttgatgaaactcaattgactcatcaagccctttat
ctcctggaggaaaacaaattatgggctgctgtggtttttccagacttagaacctacaacc
agcaatcttccaccacatttgacatacaagatccgaatggatatagatgcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttacgttatatctggggaggctttgcctatctccaggacatgattgagcatgggattata
aagacccagaccagcactgaagtgccattaggaatttatctgcagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctagcctggatatattcagtctctatgattgtgaagagtatagtgctggagaaggaaatg
cgtctgaaagaagctatgaagaacaggggcataaccaatggcatggtttggtgcacttgg
ttcctagacagcttttccatgatggctgtgagcacattcctcctcacagctctgattatg
catggacaagtgctacgttatagcaatccacttctcttctttctgttcctactgaccttc
accacagctaccatcatgcagtgtttcttgttcaccaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacatcgtctgcttt
gtttggcaagaccggctgactgttcatctgaagatcctagcaagtttgctttctcaagta
gcctttgggtttggtacggaatacttgtcacgctacgaagaacaaggtcttggcctacag
tggggtaacatcagaaccagtcctttggaaggagatgaatatagttttcttttttccatt
aacatgatgctttttgatgcttttctttatggaatacttgcttggtatctcgataacgtt
tttccaggggcctatgggttaccacagccttggtatttccctgtgctggaatcctattgg
cttggctccagaagcccagaagctgagaaaacagcaactgctgataaaaaaattccagag
tcagaaggttgtgtggatcagaagaccatggaaagggaaaaaaatgaaagcaacacaaat
aaatctgaagaacctgaaaaaacagaagaaaagagtgacagccaggggaagaaggacggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaacccgacgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaataccttctttgagcccgagccaaca
ggattgattccaggagtatgcattcaggacctggtgaagatttttgcgaacaggcccaaa
ccagcagtagatgggataaatattactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaactaccatgtcgatactgacaggcctgttcccacccaca
tctggaactgtgctcattggtggcctggacatccagactcacatggactccattcggcac
agactgggaatgtgccctcagcacaacatcttattcaatcaccttactgtagcagagcac
atcttgttttattctcaactgaaaggaagatccagggaagaagctgagcaagagctagag
ataatgctggaagacatgggcctcacccataaaagaaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcttggatgaaccgacttctggagttgatccatattccagacggtctatctgggatctt
ctgctgaaatatcgcccaggcagaactattattctgtcaacccatcatatggatgaggca
gacatccttggagacagagtagccatcatatcccaagggaaagtgttctgctcaggctct
cctgtattcctaaagaactgttttggctctggcttttatctcacccttgttcgcaaaatg
agaaccacaaaaatgggaagagctgcatcattttgtagctgtggctctcagtgctcctgc
tcctgctccagctgtgtgcacaggagtgaagaagaagctccagagctggaactggatgga
gatctaaatgagctggcggaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggaactcatttatcttttgcccaataaaaactttaaacaacgatcttat
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggccacagcagaagctgaccctgaa
atgcaaaagacaggagatactcaagaaaatggttctgctcttggcaaaactcctactgag
aacaaaccagctgaacaaactgtcctgaaaactacagacacttctcgaatggcagtaggc
agagcaggagatcgaaatgaaggcaaagcgtcccgacagtataaaggctttcagcttgta
catcagcagatcaaagcactgctcatcaaacgcttccaccatgcctcccgcagctacaag
gacttcctagcacaggttgttctccctgctagttttgtgttgctgtctctagtacttact
gtcattattcctccatttggagaatatcctgccttaatattacatccttggatctatgga
caacagtttactttcttcagcaatgaacgtcctggcaatgagcaaatggtctcccttact
catgctttcttgaataaaccaggatttggaattcgctgcatgaagaatcagcctcttttg
aactatccatgcaataatatgccaactgcctggaacacacctgctgttcatcctaaccta
agcagcctcctgctgagccaagagtggacccccgagaatccatcaccttcctgcaagtgc
agcactcacaagaaactcactatgctgccagaatgccctgctggtgcaggaggcctccca
ccaccacagagagtgcagcgcagcacagaaattcttcaagatctgacccgcagaaatgtt
tcagattttctggtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatac
tgggtcaatgagcagagatatggaggaatttctataggaggaaggcttccagtccttcat
gtttctggagatcaaatcgtcaattttttaagtgatcttggccgaatgatgaatgtgaca
ggaggacaaacttcactggctgctgctaaagagatccctaatttccttaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggctggcatgctatggttagtttc
ctcaatgtagccaataatgcaatcctcagagctaatctgaggactggccaagaccctgag
gaacatgggatcactgctataaaccatcctctgaacctcaccaaggagcaactctctgaa
gtcactgtactgaccacttcagtggatgctgttgttgccatctgtgtgatttttgccatg
tcctttataccagccagttttgttttatacctgattcaagaacatgtaacaaaagccaaa
catctccagtttgtcagtggtgtgagccctcttacctattggctaacaaacttcatgtgg
gacttagtgaattatgcactgagtgctgggatggttgtggctatatttgctggattcaac
aagaaagcctacacttccccgaccaatctccctgtgttcattgccttgctgctcctgtat
ggatgggcagtaattcccatgatgtaccctgcttcctctttcttcagtatccccagcact
gcttatgtcgcgttgtcttgtattaatctctttgtgggaatcaacagcagtgccattaca
ttcatcctggaattatttgaaaataatccatctttgctgaagtttaataaaacattgaaa
aatgtgctacttgtcctgccacatttttgcttgggccgtggactcatcgacttggccatg
agccaagctgtgactgaagtatatgcaaggtttggtgaggagcatgtttctgatcccttt
cagtgggactttgttggaaagaacctggttgccatggctcttcaaggagttgtgttcttc
tttctgaatctctttatgcagcaccgtttcttctccacaagatggtttgctgagactgcc
atgtcacctattattaatgaagacgaggatgttgcagaagaaagaaaaagaattatgaat
ggaggcaacaaaactgatatcttacaattacaagaactgaccaagatttatgcaggtcga
cgcaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgctttggcctt
ttgggagtgaatggcgctggtaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctgtagtggctggcaatagtatattgacccacattagaaatgtc
catcaaaacatgggatactgccctcagtttgatgccattgatgaccttctcacaggaaga
gaacacctctatttatatgcacgcttgaggggggttccagcagaggaaatcaagagggtt
gctgaatggggcatccagaagctgggacttcccatgtacgcagaccacctggcagggacc
tacagtggtggcaacaagcgcaagctctccactgccattgccctgataggctgcccacca
ctcgtcttgctagatgaaccaactactgggatggaccctcagtcccggcgcctcctgtgg
gactcaattgttggtgtgctcagggacaggcgagcggtggttctaacctcacacagtatg
gaagaatgtgaagccctctgtacacgtttagccatcatggtacaaggtaccttcaaatgc
ctaggcacaattcaggagctaaaatacaagtttggagatggctacattgtcactctgaaa
atcaaagctccaaagtctgggctgcctccagatcctgctcctgctgagaaattcataaga
atcaacttcccagggagtttacagagagagaaacactacaacatgctgcagtatcagatt
tgctcttcttctctggctaagatttttcgattaataatctccaataaggaaaatttgcat
attgaagaatattctgtgtctcaaacaacattagatcaggtttttgtgaactttgctaaa
cagcagatggaggatgaggaaattcctttgcatccgcgtgcagctggagccagccgagaa
gccagggtgtccccagctctgcatcagcaggcagttgcatag
DBGET
integrated database retrieval system
