Sylvia atricapilla (blackcap): 136365130
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Entry
136365130 CDS
T10263
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136365130 (NDC1)
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NCBI-GeneID:
136365130
NCBI-ProteinID:
XP_066181556
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Position
9:28804239..28818350
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AA seq
672 aa
AA seq
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MEAAAGGQRVLLRQVLGWRVAAAITWSVLLLPVCTAAFIVLSGLDPFHPVRWISNSFNDL
YTSYVIFCIFLMSMVIIVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSFVHAIMG
MLVAWCATVMTKGRFQFLAVSCTPAESPEDAVPQMCLNEYHLFFLLSGAFLGYSYSLFYL
INNMNYLPFPIIQQYKYLRFRRSLRLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWICTT
MDLHTDSKLHPLDTLSGLLDLSLFYHTWLSGVFLLMTWYIAWLLFKIYATESHHFPIQPT
FAQETDQCLPKILNSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLIAQQEAAAANGRAKPPVGELKVPPQTAGAVGIEDMSFQSQRSNIVL
RASMSPLVKPFLMPVKTSPGSDVGSPFSSPALSYKMGVVDVKSPWHGSVQSPHVVRRGPK
LWTSLSDQQMNGSHHESLPVLSAARTGSEAVQPRFIYTWLQNKQEQIKNFLSKRALIMYF
FSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVV
DRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEH
KKRLQQFLEYKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggcgggcagcgggtgctgctccggcaggttctgggctggcgagtg
gccgccgccatcacctggtccgtgctgctgctgcccgtctgcaccgcggccttcatcgtc
ctcagcggcctcgaccccttccacccggtgcgctggatctccaattctttcaatgatttg
tatacttcctatgtcatcttttgtatcttcctgatgtctatggtgataatagtaataagc
atcttcaacgttgaattttatgcagtggtgccatcgataccatgctctcgattagcactg
ataggaaaaattattcaccctcagcaagtcatccattcctttgttcatgccatcatggga
atgctggttgcttggtgtgctacagtcatgacaaaagggaggttccagtttcttgctgtg
tcctgcacgcctgcagaaagcccagaagatgctgttcctcagatgtgcctaaatgagtat
caccttttctttctgctttctggagctttcttgggatacagttacagccttttctatctt
attaacaacatgaattatttgccgtttcccatcatacagcaatacaagtatttacgtttc
agaagatctttgcgtctcctgataaaacacagttgtgtggaatcactatattttgttaga
aacttctgcgtcacatactacttttttggttatatcccaaaggtgtggatttgtaccacg
atggatcttcatacagacagtaaattacatcctcttgacactctgagtggcttattggat
ctctccttgttttaccatacctggctgagtggtgtgtttctcctgatgacctggtacatt
gcctggctgctcttcaaaatctatgccacagagagtcatcattttcccattcaaccaacg
tttgctcaggagacagaccagtgcctgcctaaaatcttaaacagcaatcctcccctcctt
ataaagtttttagccttacaagacttgatgttactttcccaatattctcctgttcgacga
caggaagtctttagccttagtcagccaggtgggcacccacacaactggactgccatatcc
cgggagtgtttgagtctcctgagtgacctgactcagaggctgattgcacagcaagaagca
gcagcagcaaatgggagagcaaagccaccagtgggagagctgaaagtacctccacagact
gcaggagctgttggcatagaagacatgtcattccagtcacagaggtccaacattgttctc
agagcctccatgtctccactggttaagccattcctgatgcctgtgaagacatctcctggc
tctgatgttggttcacctttcagctctcctgctttaagttacaagatgggagttgtggat
gtgaagtctccttggcatggatcagtccagagtccccatgtggtgaggaggggaccaaag
ctgtggacatcactttcagatcagcaaatgaatggttcccaccatgaatctttgccagtg
ctctctgctgcaagaactggcagtgaggcagtgcagccaagatttatctacacatggctt
cagaacaagcaagaacagataaaaaacttcttgtccaaacgggctctgataatgtatttc
ttcagcaagcacccagaagcctccatccaagctgtcttctctgatgcccaaatgcacatc
tgggctttggaaggtctgtctcacttggtagcagcctcttttactgaagaccagtttggt
gttgtccaaactacactgccagctatcctgaacacattactgacacttcaggaggtcgta
gacagacatttcaagctgccacatgtttctagcaaacctccccggatttcagggagtctg
gtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaaacagccctg
taccggataaccactgtctttggagaacacttgaatgcggtacaagtgtctacagaacac
aagaaaagacttcagcaattcctggagtacaaagaataa
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