Sylvia atricapilla (blackcap): 136365304
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Entry
136365304 CDS
T10263
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136365304 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136365304 (DHX36)
03012 Translation factors [BR:
sati03012
]
136365304 (DHX36)
Enzymes [BR:
sati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136365304 (DHX36)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136365304 (DHX36)
Translation factors [BR:
sati03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136365304 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
136365304
NCBI-ProteinID:
XP_066181741
LinkDB
All DBs
Position
10:complement(720180..735561)
Genome browser
AA seq
986 aa
AA seq
DB search
MSYEQPRDRGRGRGRDRGGDGGDGGSASGACSSAGGPGGRGRHPSHLKGREIGLWYARRQ
GQKNRDADRQQRAVVRMDERREEQIVRLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAK
VKPDAEKAPVRKRPTWEKTSLDLDVEYLCEKPEQDANLDEQLKEELMKKKSDPRYIEMQR
FREKLPSYGMREELVRLINSNRVTVISGETGCGKTTQVTQFILDDHIERGRGSACRIVCT
QPRRISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSD
KHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCP
MIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRVHWRKGFMQGHVSRPEKEKKEEIYRQQ
WPAYLRQLQGRYSASTINALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNIS
TLHEILTSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDD
VVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL
LDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDR
QEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIAD
ARRKELSKNSKSDHLTVVNAFTGWEDARSSGFRNEKDYCWEYFLSSNTMQMLHNMKGQFA
EHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTK
TDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKD
NDQDTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIESPHPVDWKDTKCRDTAVLTA
IIDLITTQENEAVRNFAPRFQGERYS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagccccgagaccggggccgcgggcgcggccgggaccgcggcggcgat
ggcggcgatggcggctcggcctccggcgcctgctcgtcggcgggcgggcccggcgggcgg
ggacggcaccccagccacctgaagggccgcgagatcgggctgtggtacgcccgcaggcag
ggccagaagaaccgggacgccgaccggcagcagagagctgttgtgcgcatggacgagcgc
agggaagagcaaatcgtgcggctgctcaattctgtccagactaaaaacgacaaagagcaa
gaagccatgtcctggtggtccggggatgaagaaggccctgctccagaacagcctgccaaa
gtgaaaccagatgctgaaaaagctcctgtgaggaagagaccaacctgggaaaaaacatcc
ctggatttggatgtggaatatctctgtgaaaaacctgagcaggatgctaatttagatgag
cagcttaaagaagagttaatgaagaagaaatctgatcccagatatattgaaatgcagaga
ttccgagagaagctgccctcatacgggatgagagaggagctcgtgcggctgatcaacagc
aaccgtgtgacggtgatcagcggggagacgggctgcgggaagaccacgcaggtgacacag
ttcatcctggacgaccacatcgagcgcggccggggctcggcctgccgcatcgtgtgcacc
cagccgcgccggatcagcgccatctccgtggctgagagagtggctgctgagagggccgag
ggctgtggcaatggcaggagcacgggctaccagatccgcctgcagagtcggttgccaagg
aaacaaggttcaattttgtactgtaccacgggaattgtcctgcagtggcttcagtcagat
aagcacttgtccagcatcagtcatgtagttcttgatgaaatccacgaaagaaatcttcag
tcagatgttttaatgagcattattaaagatcttctgaatgttcgactggatctgaaagtc
atactgatgagtgctactttaaatgcagagaagttttctgagtactttgaccattgccca
atgattcacatccctggcttcactttcccagtggtggaatatctgctggaagatgtcatt
gagaagttgaggtacaccccagaaaagacggaccgtcgggtgcactggaggaagggcttc
atgcagggccacgtgagcaggccagagaaggagaagaaggaggagatctacaggcagcag
tggccagcctacctaaggcagctgcagggcaggtactcagccagcacaatcaatgccctg
gagatgatggatgatgacaaggtggacctggaccttgtggcagcactgatcagacacatc
gtgctggaggaggaggatggtgcaattctggtgtttctgccgggctgggataacatcagc
actttgcatgagatcttgacgtctcaagtcatgtttaagtcagataggtttattatcata
cctttgcattcactgatgcctactgttaaccagactcaggtgttcaagaagaccccgcca
ggagtgaggaaaatcgtgattgcaaccaacattgcagagaccagcatcacaatcgatgac
gtggtgtttgttatagatggggggaagataaaggagactcactttgacacccagaacaac
atcagcaccatggcagcagagtgggtcagcaaggccaatgccaagcagaggaagggtcga
gcagggagagttcagccaggccactgttaccatctgtacaatggactgcgtgccagtctc
ctggatgattatcagttaccagagatcctcaggacacccttggaagagctctgcttacaa
atcaagatcctgaagctgggtggaattgcctattttctgagcaaactgatggaccccccg
tctcgtgacgctgtgatgttggccataaatcacctcatggagctgaacgctctggacagg
caggaggagctgactcccctgggtgtccacctggcacggctgcccgtggagccacacatc
ggcaagatgatcctctttggggccttgttctgctgcctggaccccgtgctcaccattgca
gccagcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagat
gcaagaagaaaggagctctcaaagaactcgaaaagtgaccatctgactgtggtgaatgct
ttcactggctgggaagatgctcggagctctggtttcaggaatgagaaggactattgctgg
gaatatttcctgtcctcaaacaccatgcagatgctgcataacatgaaagggcagtttgct
gagcacctccttgcagctggatttgtgaatagcagaaaccccaaggatcccaaatctaac
accaactcaggtaatgagaagctgctcaaagcagtcatctgtgctggcctctaccccaaa
gtggcaaagatccggcccagcttcagcaaaaagagaaaaatggtgaaggtttgcaccaag
acagatggatcagtgaatatccatcccaaatcagtgaatgtggaggaaacagagttccat
tataactggctcgtgtaccatttgaagatgaggaccagcagcatttacctgtatgactgt
acagaggtgtctccatactgcctgctgttctttggaggggatatatccattcagaaggac
aacgaccaggacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaata
gccaacttggtcaagaaactgcgacaagaactggatgacctcctccaagagaaaatcgag
agccctcatcccgtggactggaaggacactaagtgcagggacacggccgtgctgactgcc
attatagacttgatcaccacgcaggagaacgaggccgtccgcaacttcgcgccgcgcttc
cagggcgagcgctacagctga
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