KEGG   Sylvia atricapilla (blackcap): 136365398
Entry
136365398         CDS       T10263                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
sati  Sylvia atricapilla (blackcap)
Pathway
sati03030  DNA replication
sati03410  Base excision repair
sati03420  Nucleotide excision repair
sati03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sati00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    136365398 (RFC4)
   03410 Base excision repair
    136365398 (RFC4)
   03420 Nucleotide excision repair
    136365398 (RFC4)
   03430 Mismatch repair
    136365398 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sati03032]
    136365398 (RFC4)
   03036 Chromosome and associated proteins [BR:sati03036]
    136365398 (RFC4)
   03400 DNA repair and recombination proteins [BR:sati03400]
    136365398 (RFC4)
DNA replication proteins [BR:sati03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    136365398 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    136365398 (RFC4)
Chromosome and associated proteins [BR:sati03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    136365398 (RFC4)
DNA repair and recombination proteins [BR:sati03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     136365398 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    136365398 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 AAA_lid_RFC1 Rad17 AAA_16 AAA_11 AAA_22 AAA_30 SLFN-g3_helicase Mg_chelatase DUF815 AAA_14 AAA_24 RuvB_N AAA_19 AAA_5 TIP49_C AAA_28 ResIII ParB AAA_7
Other DBs
NCBI-GeneID: 136365398
NCBI-ProteinID: XP_066181897
UniProt: A0A7K7DUW3
LinkDB
Position
10:8262657..8274734
AA seq 362 aa
MQAFLKGPASISTKPVAAKEKSAAGSSGEGKRTKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDSIQQQRLLDVSEKEHVKISDEAVSYLVNVSEGDLRKAI
TFLQSATRLMGGKEITEKIITEIAGVIPKETIDELLLGCQSGSFEKLETLAKNLINEGFA
VAQLVNQLHDTIVESEDYSDKQKSAIVEKLAEVDKCLADGADEFLQLMSLCALVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccggcttccatcagcaccaagcccgtcgctgccaaggaa
aagagcgcggccgggagcagcggggagggcaagaggaccaaacccatcccctgggtggag
aaatatcgccccaagaatgtggatgaagtcgctttccaggatgaagttgtagctgtgctg
aagaagtccctggaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgctagagaactgtttgggcctgatttattccga
caaagagtccttgagttaaatgcttctgatgagcgtgggatacaagtgattcgggagaaa
gtgaaggcttttgctcagctaacagcctctggaagccgttcagatggtaaaatgtgtcct
ccttttaaaattgtgatcttggatgaagcagactccatgacttcagcagcccaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgtcttatttgtaactac
atcagcagaataatcgaacctttaacatctcgatgctccaaattccgcttcaagcctttg
tccgacagtatccaacagcagaggctgttggatgtttctgagaaggaacatgtgaaaatc
agtgatgaggcagtatcatacctggtgaatgtgtcagaaggggacttaagaaaagcaatt
acttttcttcaaagtgccactcggctaatgggtgggaaggagatcacagagaagataatc
actgaaattgctggggtcatcccaaaagaaacaattgatgaactgctattgggctgccag
agtggttcctttgagaaactggaaaccctagcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcatgacaccattgtggagagtgaagattacagtgac
aagcagaaatctgccatagttgagaaacttgcagaagtggacaaatgcctggcagacggt
gctgatgagttcttgcagctgatgagtctctgtgcccttgtgatgcagcagctcacacag
aacacctga

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