Sylvia atricapilla (blackcap): 136365461
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Entry
136365461 CDS
T10263
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136365461 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136365461 (RUBCN)
Membrane trafficking [BR:
sati04131
]
Autophagy
Other autophagy associated proteins
Others
136365461 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
136365461
NCBI-ProteinID:
XP_066182027
LinkDB
All DBs
Position
10:9760220..9786162
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AA seq
1047 aa
AA seq
DB search
MEIGPHAGHAESRKEHWKLLGNLKTTVEGLVSISNPNVWSKYGGLERLCRDMHSILYHGL
IRDKVCCRQKDYWQFVKDIRWLSPGSAHHLEKFITLQESGQRDPEGPGDQAIAQLWLQHS
LQCHCLSAQLRPLLGNRQYIRKFYTDTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDTS
MLAGTSLPSLCASDPSAGTREMCDHSGEGHKSRLPGALGCLDHFTESLLTRKSDNPSPVT
KSQSLTALPASLCVPATTCTQQRCFGSFSSLQHPASSGLSDRRPVSSCGSSNSSQPQERC
PSTRSSSFSEGRSPLEQPNSVTRFHVPSPKDPFSPASEMSSSTTSQSEDTWTGSQDDPQS
DVNDGPEYLAIGNLGRRGRACSSTSTSSTKSSSSKLFSSSSSQKLDSVSSLGEQGASGGG
SRGLSLLRRSSFSEGQSSAPQGILKKSHMRSHSDTNVTSGKLHGGLRDITIIIEDPVAES
HGDPSGGRGPVSASTQSSELSTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQD
FGSCADLEKENAHFSISESLIAAIELMKCNMMNRQLEEEEEDSDKEIQELKQKIRIRRQQ
IRTRHLFPTCQEIGSDSLLATDSGSQFSSHGSMRLSDSGSAEDVEEYEIRDGNDGSNLIQ
MSKNGLSVSMASLFSDADIKRNPDSSRKSFLSSDSISHSFLNSNSAEAVAMGLLKQFEGM
QLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQI
IFNVHSAPARKVAVAKQNYRCAGCGIRTDPDYIKRMRYCEYLGKYFCQCCHENAQTVIPS
HILRKWDFSKYYVSNFSKDLLSKIWSDPLFNVQAINPALYQKVKALNQVRLLRIQLFHMK
NMFKTCRLAKDLLDSFDTVPGHLTEDLHLYSLSDFSAIKKGDLMPRLTELLKAGSLHIDK
CMLCQAKGFICEFCQNEDDIIFPFELNKCKTCEECKACYHKSCFKSTHCPRCERLQARRE
LMDKQSAESYISDCEDELEQPEAVAAT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgggccccacgcggggcacgcggagagcaggaaggagcactggaagctcctt
ggcaacctgaagaccacagtggaaggtttggtgtccataagcaacccaaatgtctggtcc
aagtatggcggcttggagcggctctgcagagacatgcacagcatcctctaccacgggctc
atccgtgacaaggtgtgctgcagacagaaggattactggcagtttgtgaaggacattcgc
tggctcagtccaggctctgctcatcacctggagaagttcatcaccctgcaggagagtggc
cagcgtgaccctgagggcccaggggaccaggccattgcgcagctgtggctgcagcacagc
ctgcagtgccactgcctgtcagcacagctgaggccgctcctggggaaccgccagtacatc
aggaagttctacacagatactgccttcctgctcagtgacgcccacgtcacggccatgctg
cagtgcctggaagctgttgagcagaacaatcccaggcttctggctcagatcgacacctcc
atgctggccggcacgtcactgccatcactgtgcgcgtcagatccttctgctgggacaaga
gagatgtgtgatcacagtggtgagggacacaagagccgtctgccgggagcactgggctgc
ctggatcatttcactgagagcctgcttaccaggaagagtgacaatccatctccagtgacg
aagagtcagagcctgactgccctccctgcatccctgtgtgtccctgccaccacctgcaca
cagcaacgctgctttgggtctttctccagcctccaacatccagcctcctctggcctctca
gacaggagaccagtgagttcctgtggcagctccaactccagccagccccaggagcgctgc
ccgtccactcggtcctcctccttcagcgagggcaggtcccctctggagcagcccaactct
gtcacccgcttccacgtcccctcacccaaagatcccttctctccagccagcgagatgagc
tccagcaccaccagccagagcgaggatacttggacagggagtcaggatgatccacagagt
gatgttaatgacgggccggagtacctggccattgggaacttgggacgccggggccgggca
tgcagcagcaccagcaccagcagcaccaagagcagtagctccaaactcttctcctccagc
agctcccagaaactggactcagtatcatccctaggggagcaaggggcaagtggaggtggc
agcaggggcctgagcctgttgcgccggtccagcttctcagagggacagtcttcagctcca
cagggcatcctcaagaagagccacatgcgctcacactctgacaccaatgtgacttctggg
aagttgcacggaggcctcagggatatcaccattataatagaagatccagtggcagagtcc
catggtgatccaagtggagggagagggccggtctctgcttccacacagagcagtgagctg
agcacacccagctccctctacatggaatatgactctgggcagtacctgagctcaggggaa
gggatgttcaggagaccttcggaagggcagtccctcatcagctatctctctgagcaggac
tttggcagctgtgctgacctggagaaggagaatgcccacttcagcatctccgagtccctg
atcgctgccattgagctgatgaaatgcaacatgatgaacaggcagctggaagaggaggaa
gaagacagtgacaaggagatccaggagcttaaacaaaagattcgcattcggcgccagcag
atccgcaccaggcacctgttccctacctgccaggagattggctctgacagtctcctggca
acagacagtgggtctcagttcagctcccacggctccatgcggctctctgactctggctct
gcggaggatgtggaagagtatgagatccgagatggtaacgatggatctaacctgattcaa
atgtccaagaacggcctctcagtgtcaatggcttccttgttctcagatgcagacatcaag
aggaacccagactccagcagaaagtcctttctctcctcggactccatatcccattccttt
ctcaattcaaactcagcagaggcggtggctatgggcttgctgaagcagtttgagggcatg
cagctcccagctgcctctgaattggagtggctggtccctgagcatgacgctccacagaag
ctcctgcccatccctgactctctgcctatctctcccgacgatggagagcatgccgacatc
tacaagctgaggatccgggtgcgcggaaacctggagtgggccccgccgcgaccgcagatc
atcttcaatgttcactcagccccagcgaggaaggtggctgtggccaagcagaattaccgg
tgtgcaggctgtggcatccggactgatcctgattacatcaagcggatgcggtactgcgag
tacctgggcaagtatttctgccagtgctgccatgagaacgcccagaccgtcatccccagc
cacattctgcgcaagtgggacttcagcaagtactatgtgagcaacttctccaaagacctg
ctgagcaagatctggagtgacccgctcttcaacgtgcaagctatcaatcctgccctgtac
cagaaagtgaaggctctcaaccaagtgcggctgctgcgaatccagctttttcacatgaag
aacatgttcaagacgtgccggctagctaaagacctcttggactcctttgacacagtgcct
ggccacttgacagaggatttgcacctctactcactgagtgacttcagtgccatcaaaaag
ggggacctgatgcctcgcctgacagagctcctgaaggcaggcagcctgcacattgacaaa
tgcatgctgtgccaagccaaaggcttcatctgtgagttctgccagaatgaggatgacatc
atcttcccctttgagctcaacaagtgcaaaacatgtgaagagtgcaaagcctgctaccac
aaatcctgcttcaaatccacccactgtccccggtgcgagcgtcttcaagcccggagagag
ctgatggacaagcagagcgcagagtcctacatctcggactgcgaagatgagctggagcag
ccagaggcagtggcagccacatga
DBGET
integrated database retrieval system
