Sylvia atricapilla (blackcap): 136365517
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Entry
136365517 CDS
T10263
Symbol
ARHGEF4
Name
(RefSeq) rho guanine nucleotide exchange factor 4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
136365517 (ARHGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136365517 (ARHGEF4)
Membrane trafficking [BR:
sati04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
136365517 (ARHGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Amdo_NSP_1-3
Motif
Other DBs
NCBI-GeneID:
136365517
NCBI-ProteinID:
XP_066182137
LinkDB
All DBs
Position
10:15178628..15302847
Genome browser
AA seq
1349 aa
AA seq
DB search
MASGEEPCKTKRGFEFKAKQLGKTGFRSRGTGHYQVSKEEGLKAYRRTEKGLNITSAVTL
QTSSSVSSLCRGHGAAVSLQRPSIVSEQAVGRQGKERCNGSNEETGICVGPSPRDRKEGS
PAEHTSSPSKDSALSLEVSDVFDEPLNRETHSTFMLGLDNVSTCSTNSEELDENSSHILG
SNSSLHKTVQKPAKNENSGKASKFLVFSKMTSLRKTKPASWENEGSSSTFGSKAKTEELD
VGKDDEDSASLLSFKSCSSGLLFHRKESYTSEYSDDDDLFYERSAGLFTRLSLRKASGSG
RILMEDADRQVSGSSENNDNEPVEHSGIRKSFPENEHKRNKTPEGKKFRTRLALAHKSLS
SLFESKCPEKENTEQSSKASVKNEKEKAKLRQSAWKAFLKSKEADGLKRPVLVSLSSTQE
SLHGTSGRVLTPVELQHSSNGHTYLKTETDHGSSTDSNYFDSSVEPVDVSPPAHMWRRRV
QSHDLGIRYSQSSDCDEQQEVLSNSLNTSLEEYWMKSPFSTSDLQLAFSQSSPSCPQLSN
SDGKDMPCRPMSPKPQSSRSTAQHKNFRYPGRVCATSMIFFGGSSGVESNLEAPERPKTL
KPRGSLLHSLDDFQRDDSGISSQSQISLNTASSISDMLRDEFVKQESEQPCQTAPEKRPN
KQWAPHGKRRPPRVPPCPRPVSTLESRAQRLSFPAPDEKAKEIPESRRKRPKPLYKCFSF
DDVWMERNQKRKLEKKTQPEGGVQLQHLPEDPSKAGVSPSITSPVAFDILPLKLHPFSQS
TPTGLDCVGWKRRVSAPVITDGALDKTALTDDVGSEEDLYEDFRSSNHRYGHPGGGGEQL
AINELISDGSVVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGWFPA
SFVRLRVNQDEPMEDYPLKVEGGKDDDSRRFGMGQTTKDQMRTNVINEIISTERDYIKHL
KDICEGYIKQCRKRADMFTEEQLKTIFGNIEDIYRCQKKFVKALEKKFNKDHPHLSEVGS
CFLEYQTEFQIYSEYCNNHPNACMELSRLTKVNKYVYFFEACRLLQKMIDISLDGFLLTP
VQKICKYPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDKIAQWQS
SIEDWEGEDVLVRSSELIYSGELAKISHPQAKSQQRMFFLFDHQLVCCKKDLLRRDILYY
KSRINMDDMEILDVEDGKDKDFNISVKNAFKLHCRDTEEVHLFCAKKPEQKQRWLKAFEN
ERRQVQLDQETGFSITEVQKKQAMLNASKQHHAGKPKAVTRPYYDFLMRQKHPTLPTTLP
QQQVFMLAEPKRKPSNFWQNISRLTPFRK
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggggaagagccctgcaaaacaaagagaggttttgaattcaaggccaaacag
ttaggaaagacaggctttagaagccgtggaacaggccattaccaggtgtctaaggaagag
ggattgaaagcatatcgaagaacagagaaaggtttaaatattaccagtgcagtgacactg
caaaccagcagcagtgtaagcagtttgtgtcggggacatggtgctgctgtcagccttcag
cggcccagcattgtctctgaacaagcagtaggcaggcaaggaaaggaaagatgtaatggc
tcaaatgaagaaacaggtatctgtgtaggaccctctcctcgggacagaaaggagggctct
cctgcagagcacacctctagccccagcaaagacagtgccctcagtctggaggtgtctgat
gtctttgatgagcctctgaacagggagacccacagcactttcatgctgggcctggataat
gtaagtacctgcagcactaacagcgaggagctggatgagaactcatcccacatcctggga
agtaacagcagtcttcataaaactgttcagaagccagcaaagaatgagaatagcgggaaa
gcttccaagtttttggtattctccaaaatgacatctctcaggaaaactaagcctgcctca
tgggaaaatgaggggagcagcagtacctttggcagcaaggcaaagacagaagaactggat
gttgggaaagatgatgaagactctgcaagtttactgtctttcaaaagttgctcgtctggt
ttactcttccacaggaaggaaagttacacctctgagtactctgatgatgatgatttattt
tatgagagatctgcaggattattcaccagactgagcctgaggaaggcctctggctctggt
cggatactgatggaagatgcagatcgacaagtttcaggttcatctgaaaacaatgacaat
gaacctgtggagcattcaggtattagaaaatcattccctgaaaatgaacacaaaagaaac
aaaaccccagagggcaagaagttcaggacaaggttggcgttggcacacaaatccctctca
agcttatttgagtccaaatgtccagaaaaggaaaacactgagcaaagctcaaaagcatca
gtgaaaaatgaaaaggagaaagccaagcttcgccagagcgcctggaaagcttttctaaaa
agcaaggaggcagatggactaaaaaggcctgtcttagtaagtttatcatccacacaggag
agtcttcatggaaccagtggccgtgtgttaacaccagtagagctacagcatagctccaat
ggacacacttatctaaaaacagaaacagatcatggctcctcaacagactccaactatttt
gacagctctgtggagcctgttgatgtctctccacctgcacatatgtggagaagacgagta
cagtcccatgacttgggtatcagatactcccagagttcagactgtgatgaacagcaggaa
gttctgagcaacagtttaaatacttctctagaggaatactggatgaaatctccatttagc
accagtgatttgcagttggcatttagtcagtcaagtccatcgtgtccccagctctcaaat
tctgatggcaaagacatgccttgtaggcccatgagtcccaaacctcagagttcacgatcc
actgctcaacacaagaacttccgctatcctgggcgagtgtgtgccacttccatgatcttt
tttgggggcagctctggagtggaaagcaacctggaggctcctgagagaccaaagacactg
aaacccagaggaagtctcctacactcattggacgacttccagagggatgacagtggcata
agcagtcaatcccagatcagcttaaatacagcttcttccattagtgacatgctccgagat
gagtttgtaaaacaggagtcagagcagccatgtcaaacagcacctgaaaagaggccaaat
aagcagtgggctccccatggcaaaaggaggcccccccgggttccaccgtgcccacgccct
gtctccaccctggagagcagagcccagaggctctccttccctgctccagatgaaaaagcc
aaggagattccagagagcaggaggaagagacccaaacccctctataagtgcttcagcttc
gatgacgtttggatggagaggaatcaaaaaaggaaattagagaagaagacacagccagag
ggaggggttcaattgcaacatctcccagaggacccctcaaaagctggagtaagtccatcc
atcacgtctcctgttgcctttgacatcctgccactgaagctgcacccgttctcccagagc
actcccacaggcctggactgcgtgggctggaaacggcgcgtctccgctcccgtgatcacg
gacggggcgctggacaagacagccctgacggacgatgtgggcagcgaggaggatctgtac
gaggatttccgcagctccaaccaccgctacggccaccctggcggcggcggcgagcagctg
gccatcaacgagctcatcagcgatggcagcgtggtgtatgcagaagcgctctgggaccac
gtcaccatggatgaccaggagctgggattcaaggctggagatgtcatcgaagtaatggat
gccaccaacaaggagtggtggtgggggaggattctggacagcgaaggctggtttccagcc
agctttgttcggctgcgagtgaaccaggatgagcccatggaggattatccgctgaaggta
gagggaggcaaagacgacgactcccgacgctttgggatgggccagaccaccaaagaccaa
atgaggaccaacgtcatcaatgagatcataagcacagagagagactacatcaagcacctg
aaggacatttgtgagggttacattaagcagtgccgcaagagagcggacatgttcacggaa
gaacagctgaagacaatctttgggaatattgaggacatctacaggtgccagaagaaattt
gttaaagcactagagaagaaatttaacaaagaccacccacatctgagtgaggttggctca
tgcttcttggaatatcaaacagagttccagatctactcagagtactgcaacaaccacccc
aacgcctgcatggagctgtcgcgcctcaccaaggtcaacaagtacgtttacttcttcgag
gcctgccgcctgctgcagaagatgattgacatctccctggatggcttcctgctcaccccc
gtgcagaaaatctgcaaataccccctgcagctggccgagctgctcaagtacaccaacccc
cagcacagggatttcaaggacgtggaggccgccctgaacgccatgaagaacgtggctcgg
ctcattaacgagaggaagcggcggctggagaacatcgacaagatcgcccagtggcagagc
tccatagaggactgggagggagaagatgtcctagtcagaagctcagaactcatctattct
ggggaactagccaaaatctcccaccctcaagccaagagccaacagaggatgttcttcctc
tttgatcaccagcttgtctgctgcaagaaggacctcctgcgcagggacatcttgtattac
aagagtcggatcaacatggatgacatggaaatactggatgtagaagatgggaaagacaag
gacttcaatatcagtgtgaaaaatgcatttaagcttcactgcagagacactgaggaagtc
catttattctgtgcaaaaaagcctgaacagaagcagcgctggctgaaggcgtttgagaat
gaaaggaggcaggtgcagctcgaccaggagacaggattttccatcacagaggtgcagaaa
aagcaggcaatgctgaatgccagcaagcagcaccatgctgggaagcccaaggccgtcacc
aggccctactacgacttcctgatgcggcagaagcacccgacgctgcccaccacgctcccg
cagcagcaggtgttcatgctggcagagcccaagcgcaagccctcgaacttctggcagaac
atcagcaggctgacgcccttccggaaatag
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