Sylvia atricapilla (blackcap): 136365586
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Entry
136365586 CDS
T10263
Symbol
CLDN18
Name
(RefSeq) claudin-18 isoform X1
KO
K06087
claudin
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03272
Virion - Hepatitis viruses
sati04382
Cornified envelope formation
sati04514
Cell adhesion molecule (CAM) interaction
sati04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
136365586 (CLDN18)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136365586 (CLDN18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136365586 (CLDN18)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136365586 (CLDN18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sati03037
]
136365586 (CLDN18)
04147 Exosome [BR:
sati04147
]
136365586 (CLDN18)
Cilium and associated proteins [BR:
sati03037
]
Other cilia and associated proteins
Stereociliary proteins
136365586 (CLDN18)
Exosome [BR:
sati04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
136365586 (CLDN18)
Exosomal proteins of colorectal cancer cells
136365586 (CLDN18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
QcrA_N
Motif
Other DBs
NCBI-GeneID:
136365586
NCBI-ProteinID:
XP_066182259
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All DBs
Position
10:17646658..17663544
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AA seq
259 aa
AA seq
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MSTTICQVMGFLVSLLGVGGSIMATAMDTWSMQDLYDNPVTAVFQYQGLWRSCVRQSSGF
TECRPYFTILGLPAMFQAVRALMIVGIVLGILGLLVCIFALKCIRIGSMEDTAKANMTLT
SGIMFIIAGLCAITGVSVFANMLVTNFWMSTTNMFQGMQNVQNRYTFGSALFVGWVAGGL
ALVGGIMMCLACKGLIPEESRYKAVSYNASGRNISYRTGPYKSGLGYEADPKTRKGVGYE
EAPRSEDGRRSYPSKYDYV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatctgccaggtgatgggattcctcgtgtcactgctgggcgttgggggg
agcatcatggccacagccatggacacgtggagcatgcaggacctgtatgacaacccggtc
acggctgtattccagtaccaggggctgtggaggagctgcgtgcggcagagctccggcttc
accgagtgccggccgtacttcactatccttgggctgccagcaatgttccaggctgtgagg
gccctcatgatcgtggggatagtcctgggaatcctcggcctccttgtgtgcatttttgct
ctgaaatgcatccggattgggagcatggaggacactgccaaagccaacatgaccctgacc
tctggcatcatgttcatcattgctggcctgtgtgccatcactggagtgtccgtgtttgcc
aacatgctggtcacaaacttctggatgtccaccaccaacatgttccagggaatgcagaat
gttcagaacaggtacacctttggctcagccctctttgttggatgggtggcagggggcctt
gccctcgtgggaggcatcatgatgtgccttgcttgtaaagggctcatcccagaggaatcc
cgctacaaagccgtgtcctacaacgcctcaggccggaacatctcctacaggacagggccc
tacaagtctggcttggggtatgaagctgaccccaagaccaggaagggcgtgggatatgaa
gaagctcctcgaagtgaggatgggagacgctcatacccctcgaagtacgactacgtttag
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