Sylvia atricapilla (blackcap): 136365596
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Entry
136365596 CDS
T10263
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04148
Efferocytosis
Brite
Membrane trafficking [BR:
sati04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136365596 (VPS8)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136365596
NCBI-ProteinID:
XP_066182274
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Position
10:complement(18415093..18482176)
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AA seq
1393 aa
AA seq
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MAASLEPAEAEPCPELPVHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNET
DDEEESFVLEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRL
SLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGA
QYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPT
LAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVDLRDHPITQYSL
LAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVV
YFLLVKRDDSGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDHQTQEELET
IEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQVFYLGTKSVHVLTL
RSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLTGDTNKRKAVIADRMVEILLHYT
DRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRMDLLFNQIYDKMSENSVAKGIFLE
CLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENR
LYDAMIYVYNSGMNDFISPMEKLFKVIAPSLNAGKSLTDEQVVMGNKLLVYISCCLAGRA
YPLGDIPEDLVPLVKNQVFEFLIRLHSAEGSVDEEVYPYVRTLLHFDTREFLNVLALTFE
DFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFD
QVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERQL
RYDKIISCYLRDPLRKEEVFSYIHNILSMPGYSAEEKQLVWQKALDHIEELLVLSPGKAA
DLAAIHFSEQIESIISNLQDQFLLFQFLRSLLDPREGINQDLLHLPPSITEQFMELLCQY
SPDQVLETLRVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLEQLQSKLLM
LTQDDESSAEPSLLENIEDTLMKTIALCQRNSHSLDQQQREALWFPLLEAMMSPQKSSGS
SQCPYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNY
EQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVFSC
GHLYHSLCLLSKECGVVTKGLMRWMCYKCNSSNKGGKLSENFSELKKGTAASLAQMSSES
VLDPQQIQAFDQLCRLNRGTSRLALLTELARGGHGGGDKHGLLSVSHGDPATSSVFQNEN
FQLHLTPPPVSEE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtctctcgagccagcggaggccgagccgtgcccggagctgcccgtgcaccgg
ctgagcgtggcggagctcgaccgtgagctggactcccgcagcgagttgattgacgacaaa
gaattcgacattcctcaagttgatacccctccaactctggagagcatcctgaatgagact
gatgatgaagaagagtcttttgttttggaggatccctttctcttgaacattgataacacg
gatacacactcctatgacacctcttctgtggccagctctgacagtggggacaggacacac
ctgaaaaggaagaaaaaactcccagattctctctcactccatggatcagtgatacggctg
tcactcctgaaagggatttctgcccagatagtgtctgcagcagacaaagtggatgctggc
ttgcccactgcaattgcagcatcaaatctgatagcagtggggacttcccatgggttagca
ctgatatttgatcagaaccaggctctccggctgtgtctgggcagcaccgcagttggggcc
cagtatggggccatctctgctctcagcatcaacaatgactgttccaggctgctctgtggc
tttgctaaaggacagatcaccatgtgggatctggccagtgggaagctgctgcgatctata
acagatgcccaccctccaggaacagccattttgcacatcaagtttacagatgatccaaca
cttgcaatttgcaatgacagcggaggctccgtctttgaactgtcatttaagagggttatg
ggagtgaggacgtgcgagtctcggtgtctcttcagtggctccaagggggaagtttgctgt
attgagccattacatgcaaaggttgatttgagagaccatcctatcacccagtattcgctg
ctggccatggcctccctcactaagatcctggttattggcctgaagccatctctcaaagtg
tggatgacctttccctacggtcgtatggacccttcgagtgtccctctgctggcgtggcac
tttgtggccgtgcagaactcggtgaaccccatgcttgccttctgtcgaggagatgtcgtg
tactttcttctggtcaagagggatgatagtggtgcaatacatgtcacaaagcagaggcag
cttcacctgcactatgatctcatcaactttacttggatcaactcacggacagcggtgctg
ctggacagtgtggagaagctgcacgtcatagaccatcagactcaggaggagctggagacc
atcgagatctcagaggttcagctggtctacaacagcagccacttcaagtctctggccacg
gggggcaatgtcagcgaggccttggcactggtaggagagaaagcttgttaccagtccatc
agcagctgtggtggtcaggtcttttaccttggaactaagtctgttcatgtcctgacactg
agaagctggagagagagagttgaccaccttctgaaacaagaacgtctcacagatgccctg
gctcttgcttggtccttttatgaaggtaaagcaaaggctgttgtaggcttaactggggac
acaaacaagaggaaagcagtcattgctgacagaatggttgaaatccttctccattatacc
gatcggactctgaagaaatgccctgaccaaggaaaaatccaggttatggagcagcacttt
caggatgtggtgcctgtcatcgtggactactgtctcctgctgcagcgcatggatctatta
tttaaccagatatatgacaagatgagtgagaactctgtagccaaaggcatctttctggag
tgcttggagccgtatatcttgagtgataagctgatgggaatcacagctcaagtgatgaaa
gatttactgcttcacttccaagacaagaacaggttggaaaacttggaggcctgcattgtg
catatggatatcactagtttagacatacagcaggtagttctcctgtgctgggaaaaccgc
ctgtacgatgccatgatctacgtctacaacagtgggatgaacgacttcatcagtcccatg
gagaagctgttcaaagtcattgctccttcactgaatgctggaaagtctctcacagatgag
caggtggtgatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgca
tatccgctgggtgatattcctgaagatctggtacctttggtgaaaaatcaggtgtttgag
tttctgatccggctgcactccgctgagggctccgtggatgaggaggtgtatccctatgtt
cggaccctgctgcacttcgacacacgggagttcctcaatgtgctggctctgacttttgaa
gactttaagaatgataagcaagctgtggagtatcaacagagaattgtggacatccttctg
aaagtcatggtggagaattctgacttcaccccatcacaggttggctgtctctttaccttc
cttgcccggcagcttgccaagcccaacaacaccttgtttgtcaacaggacactgtttgac
caggtgctggagttcctgtgcagccctgatgacgattcccggcattctgagaggcagcag
gtccttttagagctgctccaggcaggagggatcgtgcagtttgaagagagccgccttatc
caaatggcagagaaagctgagttctatcagatctgtgagttcatgtatgaacggcagctt
cgctatgacaaaatcatcagctgttacctgcgggatcccctgaggaaggaagaggttttc
agttacatccacaacatcctgtccatgcctggctacagtgcagaggagaagcagctggtg
tggcagaaagctttggaccatatagaggagctgctagtgctgagcccaggtaaagcagct
gatctggcagccattcacttcagcgagcagatcgagagcatcatctcaaacctgcaggac
cagttcttgctcttccagttcctgaggagtctccttgatccaagagaaggcattaaccaa
gacctgctacacctcccacccagtatcactgagcagttcatggagctgctctgtcagtac
agccctgaccaggttttggagacactcagagttctggaatactgcagactggaggaaacc
atccagataacccaaaaacatcagctccatgaagcttcttcatatttactagagaagaag
ggagatatccatggtgcctttttggttatgcttgagcaattgcagagcaagttgctgatg
cttactcaagatgatgaaagctcagctgaaccctccttgctagaaaatattgaagatact
ttaatgaaaaccattgctctttgccagaggaattctcatagtttagaccagcaacagcga
gaggccctctggtttcccctgcttgaggccatgatgtccccacagaaatcctctggttca
tcgcagtgtccatactctgaatctttgaagagtttgacaatgcaagtgctgaacaacatg
gctgcgtttattgctcttccctcaatcctgcagaggattctccaggatccagtttatgga
aaagggaaacttggagaaattcaagggcttgtcttgggaatgctggacacttttaactat
gaacaaacccttctagagacaaccaccagccttttaaaccatgatctccactggtccctg
tgtaacctgagagcctctgtcaccagaggccttaccccaaagcaggattactgctgcatc
tgtctccagcagtacaaaaggaggcaagaaactgctgatgaaatcattgttttcagctgc
ggccacttgtaccactcgctgtgtctgctgagtaaggagtgtggggtggtcaccaagggc
ctcatgaggtggatgtgctacaaatgcaactccagcaacaagggagggaagctgagtgag
aacttctcagagctgaaaaaagggactgcagcatccctggcacagatgagttcagagtct
gtgttggatcctcagcaaatccaagcttttgaccagctctgccgactcaaccgaggcacc
tcccgactggctctcctgacggagctggcgcgcgggggccacggcggcggtgacaagcac
gggctgctcagtgtttcccacggggacccggccaccagcagcgtcttccagaacgagaac
ttccagctgcacctgacgccccctccggtgtctgaggagtag
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