Sylvia atricapilla (blackcap): 136365649
Help
Entry
136365649 CDS
T10263
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04510
Focal adhesion
sati04512
ECM-receptor interaction
sati04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
sati04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136365649 (COL4A3)
Glycosaminoglycan binding proteins [BR:
sati00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136365649 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136365649
NCBI-ProteinID:
XP_066182379
LinkDB
All DBs
Position
10:22579734..22638312
Genome browser
AA seq
1673 aa
AA seq
DB search
MAGGGCPGRLAPVLLLALLWPGRAAAENCVCKGKSPCFCDSTKGSKGEKGFPGAPGPPGQ
RGFPGPEGPPGPQGPKGSPGLTGLVGPKGIRGVAGIPGFSGPPGLPGEPGAAGPPGLPGV
PGCNGTKGDQGFPGPPGRRGSPGLPGVAGIKGEKGCPAEGYSQEYGAKGDPGLPGMPGLQ
GAQGAQGYPGELGPQGPPGPLGMPGMPGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPG
TVIVTLSGPDNMTDLKGEKGEKGSRGPPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGKEG
APGPPGLPGQKGEQGKPGLAGRQGAKGMKGNPGPPGACGRTEYYDYVAGEKGDEGPPGPP
GPKGQRGIPGPQGPPGAAGRPGVSRPGLRGPPGFPGPKGAKGEKGQIGLCIVGPPGLPGI
PGRPGSVGLPGPPGEPGRVTFGTGLPGLPGEPGCTGPPGPPGDTGMRGDDAGVCTDCSYV
PGLPGLPGSPGPRGRDGIPGREGTIGPKGSPGSPGTPGFPGAQGPPGFRGNQGRKGSKGE
PGYVYPEGPKGERGDPGARGDKGRRGSSGFLGRPGPKGSKGSKGEEGLAGSKGDRGLPGF
PGRLGLPGEMGLPGLPGYGPQGVRGFKGSKGIPGLPGLPGEAGLKGETSRATALPPLPAL
PGPQGPHGLPGPPGMPGRVGARGQPGDPGHSGPTGDTGFPGLGFPGNPGPKGEKGFAGDR
GPPGCEGKIGDPGRAGNLGQPGQKGEPGVVIPGEPGRMGSPGGHGSPGSKGEGGLPGLPG
LPGNPGHDGEDGLRGDRGSPGVPGDPGFPGRPAECLIGLPGLPGGQGATGPPGGRGLQGS
KGNLGPPGLSIPGIYGLPGEPGLIGPQGNMGLPGPKGQSGRPGISGLPGARGDPGVMGLL
GIPGPPGMIGRPGNPGIRGSPGFPGIKGRKGFLGEKGEPGDKGFPGPSETLVGIGDKGER
GLKGVQGQMGVRGDKGDVGVQGPPGVDGSEGIPGLPGAKGFMGLPGIPGGQGFPGAHGDK
GDMGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGEPGYPSAGPPGEPGPKGDPGPPG
VLGSKGEKGSEGLPGLTGVPGPHGIRGETGGAGIPGKCGPPGDTGVKGCQGRPGQQGVPG
PPGAVGVPGRTGLVGERGTQGQDGMPGPPGLKGEPGLPGRGIPGLRGIPGRRGIKGDMGL
PGFPGPPGVKGHQGDRGPIGPPGLVGLPGFQGTTGVAITGQKGNRGIPGARGRPGAPGFP
GLPGLSTLSVKGSKGVPGADGIPGPRGPAGDIGPPGPKGIEGRSGYPGARGDPGFLGFPG
VKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVSGKIFSIPGSKGPPGPPGIPGTPGDQGIQ
GIPGPQGPKGVKGLPGRFGHPGHPGLPGPKGERGFPGQRGQPGLIGFPGLQGLPGSPGTI
TAGPTRKGFIFTRHSQTTKIPSCPQGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRF
STMPFLFCSPNDVCSFASRNDYSYWLSTAVVMPPDMAPLSGRALEPQISRCVVCEGAAMV
IAVHSQTTVVPACPDGWMSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAVPFIECH
GRGTCNYYTNSYSFWLASLNPRRMFRRPVPQTLKAGQLENIISRCQVCMKRPI
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgac
agcacaaaaggtagtaagggtgaaaaaggttttcctggtgctccaggtccccctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
cttacaggcttagttggacccaaaggtatacgaggagtcgcaggaatacccggattttca
ggtcctccaggccttcctggtgaaccaggagctgctggtcctcctgggctcccaggtgtt
ccaggatgcaacggcacaaagggtgaccaaggatttccaggtcctccaggtcgaagaggt
tctccaggccttccaggagttgctggtatcaaaggagagaaggggtgccctgcagaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccaggaatgcctgggctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgccagggatgccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaagaaagggtgacactgggttaactggaccccctgggcccccagga
actgttattgtgacgttaagcggaccagacaacatgacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccagggccaatggggtttacagggcctgttggtgattct
caaagtgaaaagggtgaccgaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccacctggcttaccgggacaaaagggtgaacagggcaagccaggactggct
ggaaggcaaggagctaaggggatgaaaggaaaccctggaccacctggagcttgtggtcga
acggagtattatgattacgtggctggtgaaaaaggggatgagggaccccccggacctcca
ggaccaaaaggtcaacgtggcatccctgggccacagggtcctcctggagctgctggtaga
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggagca
aaaggagagaaaggacaaattggcttgtgtattgttggccctccaggactgcctggtatt
cctggcaggcctggttctgttggattaccaggtcccccaggagaaccaggtagagtaaca
tttggaactggcctaccagggcttcctggagagccagggtgtacaggacccccgggacct
ccaggagatactggcatgagaggtgatgatgctggtgtgtgtactgactgtagctacgtt
ccgggattgcccggtcttcctggttctcctggacctcgtggtcgggatggcattcctggt
agagaaggaacaataggtccaaaaggttctccaggttctccaggaacaccagggtttcca
ggggctcaaggacctccaggttttagaggaaatcaaggacgtaaaggatcaaaaggtgag
ccaggatatgtatatccagaagggccaaaaggtgagcgaggagacccgggagccagggga
gacaaaggaagaagaggttcaagtggatttctgggaagacctggccctaaaggatccaag
ggttctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggattt
cctggtagacttgggcttcctggagaaatggggcttcctggactgccagggtatggacca
caaggagtaagaggttttaaaggctctaaaggaatacctggactacctggattacctgga
gaagctggtctgaaaggagagaccagtagggcaactgcattacctccattacctgcattg
ccaggacctcaaggaccacatggtttacctggacccccaggaatgcctggtagagttgga
gcaagaggtcagccaggtgatccaggccattcaggaccaacaggtgacacaggctttcca
gggcttgggtttcctggaaacccaggtccaaaaggagaaaaaggatttgcaggagacaga
gggccaccaggttgtgaaggaaagattggagatccaggccgagctggaaacctaggacaa
ccaggacaaaagggtgagccaggcgtggttattcctggagagccaggaagaatgggttca
ccaggaggtcatggcagtcctggctcaaaaggtgaaggtggtcttccagggctcccaggc
ctcccagggaatcctggacatgatggcgaagatggcctaagaggagatcgtggctcacct
ggagttcctggagacccaggttttccagggagacctgctgaatgtcttattggcctgcca
ggtttgccaggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttca
aaaggaaacctaggtcctcctggtttgagtatcccgggaatctacggactgcctggggaa
cctggattaataggtcctcagggaaatatgggattacctggtcccaagggtcagtctgga
aggccaggaatctctggtttgccaggtgcaaggggagatccaggtgtaatgggactgtta
ggaattcctggaccccctggcatgattggaagaccaggcaaccctggtatcagaggttct
cctggcttcccaggaataaagggaagaaaaggattccttggagaaaaaggtgaaccaggt
gataaaggttttcctggaccatctgagaccttggttggtattggggacaaaggagaaaga
ggtttaaaaggagttcaaggccaaatgggtgtaaggggagacaaaggagatgttggtgtg
caaggtcccccaggtgttgatgggtctgaaggaattcctggtctaccaggagccaaagga
tttatgggtcttccagggattcctggaggacaaggattcccaggtgctcatggagacaaa
ggagacatgggaattccaggtccaaaaggccagaaaggatctccaggcttcccaggacca
tcaggtgaccctggtccaccaggctatggtggctttccaggtgacaaaggagaacctggg
tacccatctgctgggcctccaggagaacctggtccaaagggagatccaggtcccccagga
gttcttggcagcaaaggagaaaagggctctgagggtcttccaggacttacaggagtacca
ggaccacacgggatcagaggggaaactggaggtgcaggaatcccaggaaaatgtggaccc
cctggagatactggtgttaaaggatgccagggccgcccaggacagcagggagtcccaggc
cctcccggtgctgttggagtccctggaagaactggacttgttggtgaaaggggtactcaa
ggtcaggatggtatgcctgggcccccaggactaaaaggagaaccaggactaccagggaga
gggatccctggtcttcgaggtattcctggacgtagaggaatcaaaggggacatgggactg
cctggttttcctgggcctccaggtgtgaaaggtcatcagggagatcgaggacccattgga
cctcctggcttagtggggttacctggatttcaaggcaccacaggcgtggctatcactggc
cagaaagggaacagaggtatccctggtgcacgtggaagaccaggtgctcctggttttcca
ggccttcctggtctttccactctcagcgtgaaaggaagcaaaggtgtcccaggggcggat
ggaataccagggccaaggggcccagccggtgacattgggcctcctggtcccaaaggaata
gaaggtcgatcaggctatcctggtgctagaggggaccctggatttcttggattcccaggt
gtaaaaggagaaaagggtaatcaaggacccccaggaccacaaggtgcagagggcccgagg
ggaccaaagggccagcatggtccacccggagtctctggaaaaatattctccatcccagga
agcaagggtcctccaggaccgccaggaatcccaggaacaccaggtgatcaaggaattcaa
gggattcctggaccacaaggacctaaaggagtaaaaggtctaccaggacgttttggtcat
ccaggtcatccaggattgcctggtccaaaaggagagaggggatttccaggacaaagagga
caacctggattgattggctttccaggtctgcaggggttacctggatcaccaggtactatc
actgctggtccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagatt
ccttcatgcccacaagggacatcccaaatctatgttggctattcgctgctttttgtacaa
ggaaatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttc
agcaccatgccattcttgttctgtagccccaatgacgtttgtagctttgcttctcgcaat
gactattcctactggctgtccactgcagtggtgatgccaccagacatggcacccctttct
ggcagggcactagagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggta
atagcagttcacagccaaacaactgtagttcctgcatgtccagatggctggatgtctctc
tggaagggtttttcttttgttatgtacacaagtgccggctcagaagcttctggccaagca
ttggcatctcctggatcttgtctggaagaatttcgggcagtcccattcatagagtgccat
ggcagggggacatgcaactactacacaaattcctacagtttctggttggcatcattaaat
ccaagaagaatgttcaggagacctgtgccacagactttgaaagcaggacaactagaaaat
atcatcagtcgttgtcaggtttgcatgaagagaccaatctaa
DBGET
integrated database retrieval system