Sylvia atricapilla (blackcap): 136365675
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Entry
136365675 CDS
T10263
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136365675 (TRPC1)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136365675 (TRPC1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
136365675
NCBI-ProteinID:
XP_066182451
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Position
10:23841346..23859609
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AA seq
781 aa
AA seq
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MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSEEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPLLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNIIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctctaccagagcgccgacccgtccgcctcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaggagaccacgctggacgagaagcttttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcctagaggaaaacagctca
ggtgaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagctgcttttggattatggctgccagtcctcggat
gcacttttggtggccattgactcagaagtggtgggagctgttgacattctactcaatcac
cgaccaaaacgatcctccagaccaaccattgtgaaattaatggagcgcattcagaaccca
gagtactcaacaaccatggatgtggcaccagtcattttagctgctcatcgtaacaactat
gaaattctcaccatgctgttgaagcaagacatatcattacccaaacctcatgctgtgggc
tgtgagtgcacactgtgcactgccaagaacaaaaaagatagcctgcgacattccagattt
cgtcttgacatttatcggtgtttggccagtcctgccttaataatgttgacagaggaggat
ccaatcctaagagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gagttcagaaatgattatgaggagctcgcccaacagtgcaaaacctttgctaaagattta
ctggcacaagcacggaattcccgggagctggaagtgattctgaatcacacctccagtgag
gaacacgtagacaagcgaggattgttggaagagaggatgaacttaagccgcttaaaactt
gcaatcaagtataatcaaaaagagtttgttgcccagtccaactgccagcagtttctcaac
acggtgtggttcgggcagatggccggctatcggcgcaagcacacctgcaagaagatcctc
actgttctcatggttggcatcttctggccacttctgtccctgtgttacttgttagctcct
aaatctcgagtaggtcgaataattcacactccctttatgaagtttattattcatggagct
tcatatttcacgtttctgttgttacttaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatatggcttatt
ggaatggtgtggtcagatgttaagaggctctggtatgatggtttagaagattttttagaa
gaatcccgcaatcagcttagttttgtcatgaattccctgtatttggcaacttttgctctt
aaagtggttgcccataacaagtttcatgattatgctgaaaggaaggactgggatgcattc
catcctaccctagtggcagagggtctttttgcctttgccaatgttcttagttacctgcgt
ctcttcttcatgtacacaaccagctccattctgggaccactccagatttcaatggggcag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcattcact
attggattgacccaactttatgacaaaggatttactgtaaatgaagaaaaggactgtgcg
gggattttctgtgaacaacagagcaatgacacgttccattcgttcattggtacgtgcttt
gctctcttctggtacatcttctccctggcacacgtggcgatctttgtgacacgttttagc
tacggtgaagaattacagtcctttgtgggtgctgttattgttgggacctacaacgtggtg
gttgtgatagtattaactaaactcctcgtggcgatgcttcacaaaagttttcagctgata
gcaaatcatgaagataaggagtggaagtttgctcgtgccaagctttggcttagctacttc
gatgacaaatgcacactccctccaccttttaacatcataccctctcccaagactatttgt
taccttttcaacagtctcagtaaatggatctgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctcaaggaatggagaaatctgaagcagaagagagatgagaattaccaa
aaggtgatgtgttgcttagtccaccgctacttgacctccatgaggcagaagatgcaaagc
acggatcaggccactgtggagaacctcaatgagctgcggcaggacttgtccaaattccgg
aacgagatgagagacctgcttggctttcgaacttctaaatatgctatgttttatccaaga
aactga
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