Sylvia atricapilla (blackcap): 136365677
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Entry
136365677 CDS
T10263
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136365677 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sati03041
]
136365677 (U2SURP)
Spliceosome [BR:
sati03041
]
Complex A
U2 snRNP components
U2 related factors
136365677 (U2SURP)
Complex B
136365677 (U2SURP)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
136365677
NCBI-ProteinID:
XP_066182454
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All DBs
Position
10:23922190..23963950
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AA seq
1002 aa
AA seq
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MADKAPGGSQKPAGKVRGPDAHTAGSADSHPLMESKLKAFSIGKMSAAKRTLSKKEQEEL
KKKVIEDEKAAAEIYEEFLAAFEGGDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSS
RFSDQKNQPSQPSNEKPPSLLMIETKKPTLPKNKNKQTTLPGPLKKGEKEKKKSNLELFK
EELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDV
GDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNR
RDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPR
ERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAM
IMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPL
NPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAE
AAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFS
DLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETE
EVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTTEDSK
KNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDEEDTQS
SKSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKP
GQSFQEQVEHYRDKLLQREKEKEMERERDRDKKDKEKSETRSKDKKEKEECTPTRKERKR
RHSTSPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPS
GSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcgccgggcggctcgcagaaacccgccgggaaggtcagagggccagat
gcacataccgctggatctgctgattcacatcctctaatggaaagtaagcttaaagcgttc
agtattggcaaaatgagtgctgccaaacggactctgagcaagaaagagcaagaagaatta
aaaaagaaggtaatagaggatgagaaggctgctgcagaaatttatgaagaattccttgct
gcctttgaaggaggtgatggcaataaagtgaaaacatttgtaagaggaggaatcgttaat
gcatctaaagaggagcatgaaacagatgaaaaacggggtaaaatctacaaaccttcatca
cgattctcagatcaaaaaaatcagccaagtcagccatctaatgagaaacctccatccctc
ctaatgatagaaaccaaaaagcctaccctccccaaaaacaaaaacaaacaaacaactttg
cctgggcctttgaagaaaggagagaaggaaaagaaaaagagtaatttggagctttttaaa
gaagaattaaagcaaatccaagaggagcgtgatgaaaggcacaaaacaaaaggtagattg
agtcgttttgaaccaccccagtctgattcagatgggcagcggcgttcaatggatgctcct
tcaagaagaaacagatcatctggtgtactggatgattatgcaccagggtcacatgatgtt
ggagatccaagcacaacaaatttgtatctgggaaacatcaatcctcagatgaacgaagag
atgttatgccaagaatttggccgctttggaccattagcgagtgttaaaatcatgtggcca
agaactgatgaagaaagagcaagagaaagaaattgtggctttgttgcctttatgaacagg
agagatgctgaaagagcgctgaagaatttaaatggcaagatgattatgtcgtttgaaatg
aagctgggctggggcaaagctgtacctatcccaccacatccaatctacattccgccctcc
atgatggagcacaccctgccaccacccccgtcaggactgcctttcaatgcccagcccagg
gagagattgaagaatcccaatgctccaatgttaccaccaccaaaaaacaaggaagatttt
gagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctc
gctttgatacatcgaatgatagagtttgtggttcgggaagggcccatgttcgaagccatg
atcatgaaccgagaaatcaacaacccaatgttcaggtttttatttgaaaaccagactcca
gcccatgtgtattatagatggaagctttattcaattcttcagggggatgctccaaccaag
tggaggacagaagatttccgtatgttcaagaatggatccttctggaggccaccaccactg
aatccatacctgcatgggatgtcagaagagcaggaaacggaagcgtttgtggaggaaccc
aacaagaagggtgcactgaaggaagaacagagggacaaactagaggaaattctgcgtgga
ttaacacctcggaagaacgacattggagacgcaatggttttctgtctaaataatgcagaa
gctgctgaagaaattgtagactgcattacagagtcactgtccatcctcaagactcctctt
cctaagaagatcgcaagattgtatctggtgtcggatgtgttatacaactcctcagctaaa
gttgccaatgcttcctactatagaaaattttttgaaacaaaattatgtcagatattctct
gatctcaatgctacttaccgtacaatacaaggccatttacagtctgaaaatttcaagcaa
cgggtgatgacatgcttccgagcttgggaagactgggcaatctatccagaaccatttctg
atcaaactacagaatattttcttgggccttgtaaatatcatggaagacaaagaaacagag
gaagtaccggatgatcttgatggtgctcccattgaggaagagcttgatggtgctccacta
gaagatgtggatggaattcctattgatgctgctcctattgatgacctggatggagtccca
attaaatcgctggatgatgatcttgatggagttcctttggatacaactgaagactcaaaa
aagaatgagcctatatttaaagttgccccttcaaagtgggaagcagtggatgaatcagaa
ctggaagctcaagctgttactacttctaagtgggagctttttgaccaacatgaagaatct
gaggaggaggaaattcaaaatcaagaagaagaaagtgaagatgaagaagacacacagagt
tctaagtcagaagaacaacacatgtattccaatcctattaaagaggaaatgcctgaatcc
aagtcatcagtcaaatattcagaaatgagtgaagagaagcgtgccaaactccgagagata
gagcttaaggtgatgaagtttcaggatgagttagaatctgggaaaagacccaagaagcca
ggccagagttttcaggaacaagttgaacactatagagacaagctgctccagagggaaaaa
gaaaaagagatggaaagagaacgggacagagacaaaaaggacaaggaaaagtctgagacc
aggtccaaagataagaaggaaaaagaggaatgtacaccaacacgaaaagagaggaaaagg
cggcacagcacgtcccccagcccgtcccgcagcagcggcagccgcagagccaagtcgccc
tcgcccaagtcggaacgctccgagcgctccgagcgctcccacaaggagagctcccgctcc
cgctcctcacacaaagattctcccagagatgtcagtaaaaaaggcaaaaggtcgccatct
gggtccaggacacccaaaagatcaagaagatcacgatccagatccccgaagaagtcaggg
aaaaaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaagaaaagc
aaacactga
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