KEGG   Sylvia atricapilla (blackcap): 136366023
Entry
136366023         CDS       T10263                                 
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
  KO
K16482  centriolar protein POC1
Organism
sati  Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:sati00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sati03036]
    136366023 (POC1A)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sati03037]
    136366023 (POC1A)
Chromosome and associated proteins [BR:sati03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    136366023 (POC1A)
Cilium and associated proteins [BR:sati03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   136366023 (POC1A)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SCAP WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 eIF2A Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IP5PC_F Ge1_WD40 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Cytochrom_D1 Beta-prop_Nup120_160 PROPPIN Nucleoporin_N WDR54 STX6_10_61_N
Other DBs
NCBI-GeneID: 136366023
NCBI-ProteinID: XP_066182900
LinkDB
Position
11:15063810..15120023
AA seq 405 aa
MAAVCEEDPSLERHFKGHRDAVTSVDFSRAKKQIVSGSMDSSLMIWSMKPQMRAYRFVGH
KDAVLCVQFSPSGHLVASGSRDKTVRLWIPSIKGESTVFKAHTATVRSVHFSSDGQSLVT
ASDDKTVKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIVSSSDDKTVKLWDKTSRECI
HSFCEHGGFVNHVDFHPSGNCIAAGGTDSTVKLWDVRMNRLLQHYQVHSSVVNSLSFHPS
GNYLVTASSDSTLKILDLLEGRLLYTLHGHQGPATCVAFSREGDFFASGGSDEQVMVWKT
NFDADYCDVVKAQKYGSSVDGTHGTAQSEMDCGIHHKKTKTQDSSRTHEQQDEENSLANT
LEHILGQLDVLTQTVSILEQRLTLTEDKLKECLENQQKILQNKTN
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggccgccgtgtgtgaggaagatccgtccctggagaggcacttcaaaggccacagagat
gctgtcactagtgtggacttcagtcgtgctaagaaacagatagtaagtggctcgatggat
tcatctctgatgatctggagtatgaagcctcagatgagagcctatcgcttcgtgggccac
aaagatgcagttttgtgtgtccagttctcaccttctggtcacctcgtggcttcaggctct
agagacaaaacagtccgtttgtggatccctagtatcaaaggagaatcaactgtgttcaag
gctcacacagcgaccgtgagaagtgttcatttctccagtgatggccagtccttagttaca
gcttctgatgacaaaacagtcaaagtgtggacggttcacaggcagaagtttctgttctca
ctgagtcagcacatcaactgggttcgctgtgccagattctctcctgatggacgattgata
gtgtcatccagcgatgataaaactgtcaagctgtgggacaaaaccagcagagaatgcatc
cactccttctgtgagcatggagggtttgtgaaccacgtggatttccatcccagcggtaac
tgcattgccgcggggggaacggacagcacggtgaagctgtgggatgtcaggatgaacagg
ctgcttcagcattaccaagtgcacagctctgtggtcaacagtctttcctttcatccatct
ggaaactatctggttactgcgtccagtgattcaactcttaagattctagacttgctggaa
ggaagacttctctatactctgcatggtcaccagggaccagctacctgtgtagcattttca
agagagggagacttttttgcttctggaggttctgatgaacaggtgatggtgtggaagact
aactttgatgctgattattgtgatgtagtgaaagcccagaaatatggcagcagtgtggat
gggacccatggcactgcgcagtcagaaatggattgtggcattcatcataagaaaacaaaa
actcaggattctagtaggacccatgagcagcaagatgaggagaacagtcttgcaaatacc
ctggagcatattttgggacagctggatgttctgactcagacagtttccatcctggagcag
aggctgacactcactgaagacaagctgaaggaatgtcttgagaatcagcagaaaatcctt
cagaacaaaacaaactga

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