Sylvia atricapilla (blackcap): 136366027
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Entry
136366027 CDS
T10263
Symbol
NISCH
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
sati Sylvia atricapilla (blackcap)
Brite
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
136366027 (NISCH)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136366027
NCBI-ProteinID:
XP_066182909
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Position
11:15492770..15522224
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AA seq
1422 aa
AA seq
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MEAAAGGEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEIYLQTLLLKFPVTAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGLFGTSNIQEHHLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHAL
ATLSVRFSATSMKEILVPEASEFDQWEPEDALDNSSCPVTAIIPTWRTLTTLDMSHNSIS
EIDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTL
NLAGNQLERLSGLNKLYSLVNLDLSNNKIEQIDEVKNIGSLPCLEKVMLSSNPLSIIPDY
RTKVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLT
AASSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSGSTPTDHTVPQRCFE
IPDSRYKIQAPASLLASCEEYGGGHDVCLESSEEEHCAVPDPGNTIILPFNCMSYTATNQ
DFIQHLSALIVQAVQKSAPSLTENKRSPVGNSTSTDKEDGYFEMGLHEGDQTFEFSTTLD
TQSSDNVAVESVDIVKILWSFSVHIHKGLRQFASCLVLTDEMLAVFEIPHQELRGNCQHI
PSALKLTLCFPYTDLIESGFLLPEVCLTLKLKNNDHCLFIVSDSQNLQDFYSCLQTCCSQ
HYTSVLPSSTWYCRKANLQEFLCQLMELNCISAEDVEIKGCFPTYLVYGNKTNVQKVLHQ
PESAGNKKEWSKNVLCSALYSSVYKSSDQSPCVVHPCWIFLTPQHLYIVKVDFSLLPDKW
VGTEEVGSVFKLNRIPLASLVLHPTHGATQQKGSFLDGHVLELLVGYRLVTAVFVLPHEK
FHFLRIYSLLRTLLQDVKTIIIFKASSKTDGVRNHVVETNRHGQAVSLCKPHLTLSSLYP
SEFLMQKITEDNQIPVHLHVSVSLQYVSGLKGRALVEFFHSNIAEVENEELRHLMWSSVL
FYKTPNVEVMACVLLSTKAIYFLLDDSFIHADEHQSDFWNKENSDCENSSFHLSCCFVLK
LNDLQSVNVGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPV
DKDFYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTSLPSLNIL
LYVLAFQVNHFEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQL
ADGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSVPKGNSKQEGS
RSREIQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggaggcgaggacggcgaggagcccccgcgggaggcccgagtcctg
ggctccgagctggtggagacatacacggtgtacattattcaggttagtgttggcaatcat
cagtggacagtcaaacatcgttacagtgatttccatgacctgcatgaaaagcttgtttca
gagaagaaaatagataaaaatttgttacctccaaagaagatcattggaaaaaattccaaa
agccttgtggagaaaagacaaaaggaactggagatctatctgcaaactctgctgctcaag
ttccctgttactgcaccaaaagttttgtcacatttcctacactttcatttatatgagatc
aatgggatcactgctgcattggctgaagagctctttcacaaaggagagcagctcttaatg
gctggagaagtcttcaccatcaggcccttgcagttgtatgctgtcactcagcagctgctg
cagggcaaacctacctgtgctaatggagatgccaaaacagatctagggcatattctggat
ttcacttgtagactcaagtatctaaaggtcactggaacagggggactttttggaaccagt
aacattcaggagcatcacttgccttttgatctgtctattttcaaatcacttcatcaaata
gagatcagtcattgtgggggaaagcttatcaaggggttgacttcatcaaaacatgctctg
gccacactgagcgttcgattttcagcaacatcaatgaaggaaatcctggtgcctgaggcc
tctgagtttgatcagtgggagccagaggatgcactggacaattcaagttgtccagtgaca
gcaattatcccaacctggagaacattaacaactttagatatgagtcacaatagcatctct
gaaattgatgattcagtgaaattaattccaaagattgagttcctggatttaagtcacaat
ggagtgtctctggtagaaaatctacagcatctgtacaaccttgttcacctggacttatcc
tacaacaaacttacgtcactagaaggtgttcacacaaaactgggaaacatcaaaactctg
aatttagcaggaaatcagctggaaaggctgtctggccttaacaaactgtactcattagtc
aacttggatctgagcaacaacaaaatagaacagattgatgaagtgaaaaatatcggcagc
ctcccgtgcttggaaaaggtgatgttatccagcaaccccctgagcatcatccctgattac
cggaccaaagtcctcgctcagtttggagacagagcctcagaggtttgtttggataacatt
gttaccactgaaaaggaactagatacagtggaagtgctaaaagctattcaaaaagcgaag
gaggtgaaatacaaactcagcaactctgataaaaagatcagtgaggactccaggctcact
gctgccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctg
cctcgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagcagt
tttttgcaatccagtggttcgactcctacagaccatacagttccccagagatgctttgaa
ataccagactccagatataaaattcaggcacctgcatctttattggcttcatgtgaagag
tatggtggtggtcatgatgtgtgtttggagagttcagaggaagaacactgtgcagtgcct
gaccctggtaacaccatcatcttgccttttaattgtatgtcctacactgccaccaaccaa
gactttatccagcacctttctgccttgatagtgcaggctgtgcagaaatctgccccctcc
ctcacagagaataaaagaagccctgtgggtaattccacaagcacagacaaagaagatggg
tattttgaaatgggacttcatgaaggagatcagacttttgagttcagcactactttggat
actcagtcatccgacaatgtagcagtggagagtgttgacatagtcaaaattctctggagc
ttttcagttcacattcataaaggactcagacagtttgcttcctgtttggttttgaccgat
gagatgctagctgtgtttgagattcctcatcaggaattgagaggaaattgccagcacatc
ccttctgccttgaaattaacactgtgttttccctacactgatctaatagaatctggcttt
ctcctgccagaagtctgtttaactctgaagctgaaaaacaatgaccactgcttgtttatt
gtttcagactcccagaatcttcaagacttttattcctgtttacaaacatgttgctctcaa
cactacacatcagtgttaccaagctccacgtggtactgtagaaaagccaacctccaagaa
tttctctgtcagcttatggaattgaattgcatttcagcagaagatgttgaaataaaaggt
tgtttcccaacatatcttgtttatgggaataaaaccaatgttcagaaagtcttgcatcaa
ccagagtcagctggcaataagaaggaatggtcaaagaatgttttgtgttctgcactttat
tcttcagtatataaatcttctgaccagagtccctgtgtggtccacccatgttggatattt
ctaacaccccagcatttgtacatagtaaaggtggatttcagtttactgccagataaatgg
gtaggcacagaagaggtgggaagtgtatttaagctgaatagaattccactagcatcactt
gtgctgcatccaactcatggtgccacccagcagaagggttcctttttggatggacacgtg
ctggagttgcttgttggatacagattggttacagcagtgtttgttctacctcatgagaaa
ttccacttcctaaggatctacagccttttaaggacactcctgcaggatgttaagactatt
attattttcaaagcttcaagcaaaacggatggtgtaagaaatcatgtagtggagacaaac
agacacggtcaggcagtcagtttatgcaagcctcatctgacactgtcatccttgtaccca
tctgagtttcttatgcagaagataacagaagacaaccagattcctgttcaccttcatgtt
tctgtgtctctgcagtatgtatctgggctgaagggaagagccctggttgaatttttccat
agcaacattgcagaggtggaaaacgaagagttgagacacctgatgtggtcgtcagttctg
ttttacaagactcccaatgtggaagtgatggcttgtgtgcttctctcaacaaaagctatt
tactttctgttggatgattctttcattcatgcagatgagcaccagtcagatttttggaac
aaagaaaactcagactgtgaaaacagttctttccatctctcttgctgctttgtcctgaaa
cttaatgacctgcagtcagtaaacgttggcctgtttgaccaatacttccgaattactgga
cattctgcagatcacattgtcacctgcctgacgagagacagttacaacactcacaccttc
atacagcagcttatggcagtcctgtcactgcttgcacgcactccttcacctgaaccagta
gataaggacttctactctgaatttgggagtaaaaacacaggaaaaatggagaattatgaa
ctgattcactctagcagagtcaagtttatttatccaaatgaagaggaaattggggacctt
gcttttctagtggcagagaagatggatggtttgaccagtcttccatccctcaacatcctt
ctgtatgtgttggcatttcaagtaaatcactttgaaggatctgctcagaacactagttca
cttcaacctaaaacactgatattgaccagctctgatttgttcctctttgatgaagactat
atcagttacccactacctgaatttgccaaggagccaccaaagagagacaagtatcagctt
gcagatggaagacgaatccgggatttagacagagtactcatggggtatcagacatatcca
caggcccttacatttgtgtttgatgatgttcagaatcaggacctgatgcagaatttaaca
ctggatcactttggagaaactgatagtgtcccaaagggaaattccaaacaagagggcagc
aggagcagagagatccagtggtacatttttatcccaagtgcagaaagcagggagaaatta
atttcattgcttgcaagacagtgggagatcctgtgtggtagggaattgcctttggaactc
actggctag
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