Sylvia atricapilla (blackcap): 136366078
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Entry
136366078 CDS
T10263
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sati01001
]
136366078 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136366078 (DCAF1)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
136366078 (DCAF1)
Protein kinases [BR:
sati01001
]
Serine/threonine kinases: Other
Other
136366078 (DCAF1)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136366078 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
136366078
NCBI-ProteinID:
XP_066183007
LinkDB
All DBs
Position
11:complement(17107673..17155024)
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQESKRPSPRKVPSDPLLPLDEEAVDMDYGEMTVDGEQEEVSGDMEISFQL
DSSHKTSSRVNSAAKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSTSEPERVFVELSNSS
WSEMSLWVIGSNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPRSSEHTLA
KMWNVVQSNNGIKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTAVGSTATSVHTQARPSASQGPPALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEEIANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactactttgcttgagcag
tgggagaaggagcatggcagcgggcaagacatggtccctattctcaccagaatgtctgag
ctgattgagaaggagactgaagagtaccgcaaaggggacccagacccgtttgatgaccga
catccaggtcgggcagacccggagtgcatgcttggtcacttactgaggatactcttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ctaaacactgctgcctgcagacttctgctggacatcatgccaggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcacgagaggctgat
cagccactaaggacatatgcaacaggactgctgggaggagctatggaaaaccaggacatt
gctgcaaattacagggatgagaactcacaattggtggctctggtgctccgtcggctacga
gagttgcaggtcacagaaatgaccacaaaacaggaaagcaagcgccccagtcctcggaaa
gtgccatcagatcctctgctgcccctggatgaagaggctgtggatatggattacggggag
atgacagtagatggagagcaagaagaagtttctggtgatatggagatctcctttcagctc
gattcaagtcataagaccagtagcagagtaaactctgctgcaaagctagatgatggggga
ttgaggaaaagcaaatcagggaaacagcacgaaagagatggcttccggaaggccaagcaa
aagctgggcttctccacctcggaaccagagcgggtgtttgttgaactgtccaacagcagc
tggtcagaaatgtccctgtgggtgattggctctaattacacactttaccccttgactcct
gccatagagcagaggctgattcttcagtacctgactcccttgggggagtaccaagagctg
ctacccatctttatgcaacttggttcaagggagttgatgatgtactacattgacttgaag
cgaaccaatgatgtgctgctcacttttgaagcccttaagcatttggcatcgttgctgctg
cacaacaagtttgctacggagtttgttgctcatggaggagtgcagaaattactggagatt
cctcgtccttccatggcagcaacaggagtgtccatgtgtttgtattacttgtcgtacaat
caagatgctatggagagggtgtgcatgcacccccataatgtgctttcagatgtggtgaac
tacaccttgtggctgatggagtgctcccacgcctctggctgctgccatgccaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcacgatgggctg
cggcggctggttaacctgataagcactctggagatcttaaacctggaggaccaaggagcc
ctcctgagcgatgatgagatctttgccagtcgccagacggggaagcacacctgcatggcc
ctgcgccgctacttcgaggctcaccttgccatcaaactggagcaggtgaagcaatcgctg
cagcgcactgagggtggcatcctggtccatccacagcccccctacaaggcctgctcctat
actcacgagcagattgtggagatgatggagttcttgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaagttgtcttgtgtccagctcatgcttcagctc
atttccattgcctgcaactggaagacatactatgcaaggaatgacacagtacgatatgct
ttggatgtcctggccatcctgacagtagttcctaaaatccaattgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccacagtgggtattagtatcatcctt
ggagttgctgagggtgagtttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaattgtgtgtgtggcccagataaccggatctccagcatcgggaaattcatc
tctgggactcctcgtcgaaagcttcctcaggcccccaggagcagcgagcacacgttagcc
aagatgtggaatgtggtgcagtccaacaacggcatcaaggtgctgctgtcgttgctgtct
gtgaagatgccgatcactgacgcggatcagatccgggcgctggcctgcaaagccctggtg
gggctgtcgcgcagcagcaccgtccggcagatcatcagcaagctgcccctgttcagcagc
tgtcagatccagcagctgatgaaggagccggtgctgcaggacaagcgcagcgagcacgtg
aagttctgcaaatacgctgccgagctcatcgagcgcgtctcggggaagccgctgctcatt
ggcaccgatgtctcgctggcacggctgcagaaggcagatgtggtggcccagtcaaggatc
acctttcctgagaaggagctgctgctgctgattcggaaccacctcatctctaagggcctc
ggggaaacagcgtctgtccttacaaaggaggctgacctgcccatgactgcagcgtctcac
tcttctgccttcacccctgttgcggctgctgcctctccagtgactctgcctcgcactcct
cgcatagctaacggcatctcggcccgtttgagtagccacactgctgtaggttccactgcc
acctctgtccatactcaggcaaggccgtctgcatcccaaggtccacctgcccttccaggc
ccttcttacgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacggcaggaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacactg
gacagtataatcacagagtaccttagggagcagcacgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caggcgcccactaactttacctcacggctgacccgcagggcggcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccaatttct
gtgttcagggaagcaaatgaggatgagagtggctttacctgttgtgcattttctgcaaga
gaacgattcttaatgctgggtacttgcacggggcagttgaaactctacaatgtgttcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttattgctgacatctgctacgtggagccaacctctgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggacagggtcattggcacaaagggagacattgcacatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcagcacaagccatccacaagtttgacaaattcaacatgactatcagtggt
gttttccatcccaatgggctggaggtcatagtcaacactgaaatttgggacctccgaact
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagtgatgtatggagctatgttgcaggcagatgatgaggacgaccttctggaggag
agaatgagaagtccctttggctcgtctttcaggacatttaatgcaactgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggctgtcattgagaaccagggcagcatggacgccatgaacatggacacggtgtgc
aggctctatgaagtgggccggcagcggctggcagaagatgaggaggatgaagaagaagat
caggaggaagaggagcaagaggaagaagatgatgatgaagatgatgatgacacagatgac
cttgatgaactagatacagaccagctgctggaggctgagctggaggaggatgagaacaac
gagaatgctggtgaggatggagaaaatgacttttctccctccgatgatgaggagattgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagataccgacagctcggataactctgacctggaggacgacatcatc
ctgtccctgaatgagtga
DBGET
integrated database retrieval system
