Sylvia atricapilla (blackcap): 136366304
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Entry
136366304 CDS
T10263
Symbol
PKD1L3
Name
(RefSeq) polycystin-1-like protein 3
KO
K04988
polycystin 1L2
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136366304 (PKD1L3)
04091 Lectins [BR:
sati04091
]
136366304 (PKD1L3)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136366304 (PKD1L3)
Lectins [BR:
sati04091
]
C-Type lectins
Others
136366304 (PKD1L3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
REJ
GPS
PKD
AGA2
Motif
Other DBs
NCBI-GeneID:
136366304
NCBI-ProteinID:
XP_066183385
LinkDB
All DBs
Position
12:5088085..5123638
Genome browser
AA seq
2528 aa
AA seq
DB search
MLYCCCCGKQQRGRRNAEGMARMTSRAFEEGSKKSGVLESKMRATHSTELRMWLGVTVLI
SLAMCLAMEEATDEGIPCSKYQHAFKHSCYEFVRLQQTFTSAQSWCERGGGHLVFIQNED
TQEFLQKHIAEDQEWWIGLISNSLVNETTDGSISWLDTSNISYSNWYKDQPSPFSSTCGY
ILKNAKYQWGVTENCSQEFDFICEFESGQSIACDNYNATAQCGSGEVIQIEESFYGRKTP
HYCVSETPLQLETDEGCSWISVKDEVAGQCHGLQACQVAADGTFFGDPCPALGSYLSIQY
HCREGLQLAMVETCFVFENITVTLNWLLSPYSGNLSCTISTGDGHTIDPYYPLTLVSNLT
YSYSSPGEFTVFVECTTSEWHVMAQRQVIVQDKEDQLSITGCYSQYETGNSSHCRTLYGE
VLWIQVQLSAGNGVTYSMLADNRTLTESSAKEGLVPHNLTLNSASQELIGPGIHQLEIRA
SRNRTASEISRRITVHLIEPVSGIQAAVASHTLQLGEDLEVNVSVARGAPEKLMFEVIGS
NQTHWHKADGSGGEPRTYSVPVPLEGTFLAKVVAMNAFSNMSLDLGFITVLANNSHKKDS
AKEKGRYKTNTQKKNDHKIYIKPSRHVDPFTTVTLGWPENNNNSSFLWTCGACWPAWNEC
VKQQIILINQSEVQIPPSCLPPPKSAVTVRISVQNHGSEERQDEQCLYVTAKQELQLDIR
CEANCKPVNVSDEVVLTVSGQEDSQAIYYNWYLDNTFQNKSTTLPPACSLTGFQQNSLNL
LQSNTSVLRMTSSFLQTQGEAFQIKVTGTTQRGYGEGWFLVSTVPPPEAPGCALSPEHGS
VLTAFRVSCSAPASEGSGRSSPGRQLTYCFYVTPNSLLDCSPDPELFPVYLPLGEEENDF
ILHVTIIVSNNFGDTVQTNASVKVGPADVMDGNLTLQAVISQKANTILKDGNNSMSLFQL
YKSVTSVLNQQIQEESFNMSVQTNTRKELRGLMLTTLSVVNITSMQTALKMSEVLKEITY
RSEELSVSAQVEASNTLEHVSASLLAVNTEHSRDGQELKEAANYLFNAVSNVLKASVEIR
AGNTSVPEAEQSSVSHQLLSTVENLQSALLFGKAPGDEPTVLTSPSATMYMHRLQTENMD
STSINISNSSSASFTLPPASSLNVSGVDGETVDIRMVSFAMNPFFSSDSSFDISGTVGGL
SLTGLDGLIIPVSNLKENIEIMLPRLSATQEDKILLNLANYSTFQVNVTSENTSIVIYLE
SEHDIPLILYLGYGYHPNETNYDMKNHLFCKKTSGGETNSWVLSPEELIFGEGTYYFMVL
QDMGMDSTVYNGLTINATCFASRCVFWDEHQGGWNSYGCHVGPKTNPSSTQCLCNHLTFF
GSSFFVIPNAIDVSRTAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKI
TVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLDGESEPHHLNDPDTPVFERGG
VDVFLLCTFFPLGELRSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAIDIG
ECVLDKVFPVATEQDMKQFSNLFFMRTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFS
LLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNI
RPRPAQQGREKKPGKNGQVSPSLPPTPGATQAASLTPEAVAKDIRRIANSLFRALKAPSL
TSAPDLEKSTNINTLLSLVEDIICQQNRAGQGFYDENEKDSSIIVTLGAMDIQEKTRSRT
PEKRICDQLKYSGYHRCLYMQLQHVEMELELLGPHKFQMPQSYTQAVCQVQHMKNLLENQ
ICSSASISDGWSHTPNSSSDDKKSSSPRGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHY
GKENSIKWLISMVISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIDGHLSAPG
DSHPLFGVRRDSRSNIYRPPPAADVEKMKISCMKEQKAFALIREILAYLGFLWMLLLVAY
GQRDPNSYYLNKHIEDSFTDGFQDVYSYQDFFTWANTTLLKNLYGSYKGFITDGNSKLVG
SARIRQVRVKGDTCPISPRLQHIVEECHTPYSLQTEDTSVYGEHWNTSVVDNSSDLSSAW
QYQSQSKLREHPSWGKLAAYGGGGYVIHLGTDPKNASRILQYLFNNVWLDTFTRAVFVEF
TVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTNSLHIFVVAAEVIYFLFIVY
YMIVQGKLLKSLRWRYFHSKWNLLEMAIIVISWSALSVFVKRTVLGTRDISYYQEHKEDS
ISFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIA
IMFLAYSIAANLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCI
IFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKIFSFFGIKCKKEEKPVTGE
QLEQPVSE
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgctctattgctgctgttgtggcaagcagcaaagaggaaggagaaatgctgaaggcatg
gcaaggatgacatctcgagcttttgaagaaggcagcaaaaagagtggtgttctggaaagc
aagatgagggcaacacacagcactgagctgagaatgtggctgggagtcacagttctgatt
tctcttgctatgtgcttggccatggaggaagctactgatgaaggaataccttgttcaaag
taccagcatgctttcaagcattcatgctatgagtttgttagactgcagcaaaccttcaca
agcgcccagagctggtgtgagagaggaggagggcaccttgtctttattcaaaatgaggac
actcaggagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactgatc
tcaaactccctggtgaatgaaactactgatgggtcaataagttggctagacacttcaaat
ataagctacagtaactggtacaaggatcagccatctcccttctcatccacgtgtgggtac
atcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaatttgac
ttcatttgcgagtttgaatctggccagagcattgcttgtgataattacaatgccactgca
cagtgtggatcaggagaagttattcaaattgaagagagcttctatgggcggaagacccct
cactactgtgtgtcagagactcctctccagctggaaacagatgaaggctgcagctggatc
agtgtcaaggatgaagtagcaggccagtgtcatggcctgcaggcctgccaggtggcagca
gatggaactttcttcggagatccttgtccagctttgggaagctatttgtctattcaatac
cactgcagggaaggtctgcagctggctatggtagaaacatgttttgtcttcgaaaatatc
acagtcactttgaactggctgctctcaccatactctgggaatctttcctgtaccattagc
actggagatggtcacaccattgatccttactaccctctaacactggtcagcaacctcaca
tacagctactcctctcctggggagtttacagtttttgtggagtgcaccaccagcgagtgg
cacgtgatggcacagaggcaggtgattgttcaagataaggaggatcagctcagtattact
gggtgctacagccagtatgaaacagggaacagctcccactgcagaacgctctacggggag
gtgttgtggatccaagttcagctcagtgcaggcaatggagtaacctacagtatgttagca
gataacaggacactgactgaatccagtgcaaaggaaggtcttgtcccccataacctgaca
ctcaacagtgcctctcaagagctgataggcccagggatacatcagctggaaatccgagca
tccaggaacaggacggcgtcggagatctccaggaggatcactgttcatttaattgagcca
gtatctggaattcaggctgcagtagcttcccacactctgcagctgggggaggatttggag
gtgaatgtctctgtggcccgtggtgccccagagaagctgatgtttgaggtgattggatcc
aaccaaacccactggcacaaagcagacggctctggtggggagccacggacgtacagcgtt
cctgtgcccttggaaggtacttttctagcgaaagtggtggccatgaatgccttctcaaac
atgagtctggatcttggattcatcactgtgctggcaaacaattcccataaaaaagattct
gctaaggaaaaaggcagatacaaaacaaatacccaaaagaaaaatgatcacaaaatatat
attaaaccgagtcgccatgtggatcctttcacaacagttacacttggctggccagaaaac
aacaataattccagttttctctggacctgtggagcttgctggcctgcctggaatgaatgt
gtgaagcaacagataattctaatcaaccaaagtgaggtgcaaatcccaccttcctgcctt
cctcctccgaaatcagcagtgactgtcaggatttctgtccaaaaccatggcagtgaagag
aggcaggatgagcaatgcctctatgtgactgcaaaacaagaactgcaactggacatcagg
tgtgaggccaactgcaagccagtgaatgttagtgatgaagttgttttgactgtctctgga
caggaggactcccaggccatatattataactggtatttagataacacattccaaaacaag
tctacaaccctccctccagcctgtagcctgactggtttccagcagaattctttgaatttg
cttcaaagcaacacatctgtgttgagaatgaccagctccttcttgcagacacagggagaa
gcttttcagattaaagtaacaggcacgactcagcgaggttacggcgagggatggttcctg
gtgagcaccgtgcccccgcccgaagcccccggctgtgccctgagtcccgagcacggctcg
gtgctcaccgccttcagagtgtcctgcagcgctcccgcctccgagggctcgggccggtcc
agtcctggcaggcagctcacatattgcttctatgtgacaccaaattctctcctggattgt
agcccggatcctgaactctttccagtttatcttccacttggagaagaggaaaatgatttt
attttacatgtgacaattattgttagcaacaactttggtgatacagttcaaacaaatgct
tcagtgaaggttggacctgcagatgtgatggatgggaacctgaccctgcaggctgtgata
tctcagaaggcaaacaccatcctaaaagatgggaacaacagcatgagtcttttccagctg
tacaagtcagtgacgtctgtccttaatcagcagatccaagaggaaagttttaacatgtct
gtacagacaaacacacgaaaagagctccgagggctgatgctgacaactctctctgttgtt
aacataacatcaatgcagactgctctgaagatgtcagaggtattgaaagaaatcacttac
aggagtgaagagctgtctgtctcagcacaggtggaagccagcaacaccctggaacatgtc
agcgcctccttgcttgctgtaaacacagagcacagcagagatggtcaggagttaaaggaa
gcagccaactatctgtttaatgcagtgagcaatgttcttaaagcttctgtagaaatcaga
gctgggaacacttcagtgccagaggcagaacagagttcagtgtcacaccagctcctgagt
acagttgagaatctccagagtgcccttctgtttgggaaggcaccaggtgatgagccaaca
gtcctcacctctccctctgccacaatgtatatgcacagattacaaacagaaaacatggac
agcacatccattaacatttccaattccagctctgccagctttactctcccacctgcttcc
tctctcaatgtttcaggagttgatggtgaaacagtggatataaggatggtgagctttgcc
atgaatccctttttctccagtgacagcagttttgacatcagtggaacagtgggaggtctg
agtctaactggcctggatggtttgatcataccagtcagcaacctcaaagagaacattgag
atcatgttgccaaggctttcagcaactcaggaagataagattctgttgaatctggccaat
tatagcacttttcaagtcaatgttacctcagaaaacacgtctatagtgatctacctggaa
tctgaacatgacattccactaatactttacctggggtatggttatcacccaaatgaaacc
aactacgatatgaaaaatcatctcttctgtaagaaaacttctggaggtgagacaaacagc
tgggttctcagcccagaagaactcatttttggagagggaacctactatttcatggtttta
caagatatgggaatggattcaacagtctacaatgggctaactataaacgccacttgcttt
gcatcccgctgtgtattttgggatgagcaccagggcggctggaacagctatggatgtcat
gtaggaccaaaaacaaatcctagcagcacacagtgcctctgcaaccatctgaccttcttt
gggagctccttctttgtcatacccaatgccatagatgtcagcagaacagcacagctgttt
gggacgtttgtggacaatcctgtggtggtgacaactgtagggtgcatctttctgatatat
gtgcttgtagttatttgggctcgaaggaaagacatccaggatgatgccaaagtgaaaatc
acagtcctggaagacaatgacccctttgctcagtatcgttacctcgtgacagttttcaca
ggacaccgccgcggcgcagccacaacctccaaggtgactctcaccctctatggactggat
ggagagagtgagccccaccatctaaatgatcctgatacaccagtctttgaacgtggagga
gtggatgttttcctcctctgtaccttcttccctcttggggaactgcggagtattagactg
tggcatgataattcaggggacagtccatcctggtatgtgaatcgagtattagtccatgat
ctggcatgggatcagaaatggtacttcctctgtaactcttggctagccattgatattgga
gaatgtgtcctagataaagtgttcccagtagcaacagaacaggacatgaagcagttcagc
aatctgtttttcatgaggacctccaagggtttccaggatgggcacatctggtactcggtt
ttcagccgctccccacgaagctccttcacgcgagcccagcgtgtgtcctgttgcttctca
cttctcctctgcaccatgctgaccagcatcatgttctggggggtgccaaaggatcctgct
gagcagaaaatggatttgggtaagatcgagttcacatggcaggaagtgatgattggcttt
gagagctccctcctcatgttccccatcaacctgctcattgtgcagatcttcaggaacata
cggccccggccagcccagcagggcagagagaagaagccaggaaaaaatggccaagtgtcc
ccaagcctgcctcccaccccaggggccacccaggctgcctctctcactccagaggctgtg
gcaaaggacataagaagaattgccaactcactcttcagagccctgaaggctccatctctc
acctcagcaccagaccttgaaaaatcaactaatatcaacacactcctgtcattggttgag
gacatcatctgtcagcagaacagagctggacaagggttttatgatgagaacgagaaggat
agctctataattgtcacattgggtgctatggatatccaagaaaaaacaagaagtcgaact
ccagagaaaagaatttgtgaccagctgaaatacagtggttaccatcgctgcttgtacatg
caactccagcatgtagagatggagctggaattactggggcctcataaatttcagatgcct
caaagttacacacaagctgtttgtcaggttcagcatatgaagaacctcctggagaaccaa
atctgctcatcagcatccatcagtgacgggtggtcccatactccaaactcgtccagtgat
gacaagaaaagttcctctcccagagggctgccctggtggtttgtgttcattgcttggttc
cttgtagcagccaccagcggtgtgtctgggttctttaccatgctctatggactccattat
ggcaaggagaactccatcaagtggctcatctccatggtcatctccttcttggaaagtctt
ttcatcacacagcccttaaaggtgctgggatttgctgctttttttgctctggttctgaag
aaggtggaacatgaggatgaagaaaacacagctattgatgggcatttatctgcaccaggt
gattcacaccctctctttggggtccgaagggacagcagaagcaatatttaccggccacct
cctgctgctgatgtggagaaaatgaaaatcagctgcatgaaggagcagaaagcatttgcc
ctcatcagagaaatcctggcctacctggggtttttatggatgttgttactggttgcctat
gggcagagagatcccaattcctactatttaaacaaacacattgaagacagctttacagat
ggattccaggatgtctacagttaccaggattttttcacgtgggcaaacactactttactc
aaaaatctttatggatcatataaaggattcattacagatggcaattccaagctggtgggt
agtgctcgaattcgccaagtaagagtgaaaggagacacctgccctatttctcccagactc
cagcacatagttgaggaatgccacactccatactccctacaaacagaagatacatcagtt
tatggggagcactggaatacctcagtcgttgataactcctctgacttgagctcagcatgg
cagtatcagagtcagtccaaactgagagaacaccccagctggggtaaacttgctgcctat
ggtggagggggatatgtcattcacctgggaactgaccctaaaaatgcctccagaattctc
cagtaccttttcaacaatgtctggcttgacaccttcacaagagcagtctttgttgaattt
acagtctacaatgccaacgtgaacctcttctgcattataagcctgatgtttgaaagcaat
gctttaggggccttcttcaccagtgcggagctgcaaagtgtccggctctacccctacacc
aacagcctccacatctttgtggttgcagcagaagtcatttatttcctctttattgtgtac
tacatgatagtacagggaaagctgctgaagagtctgagatggagatacttccacagcaag
tggaatctcctggagatggccattatagtgattagctggagtgctctgtcagtgtttgtg
aaacggacggtccttgggacccgggacatcagctactatcaggaacacaaggaggactcc
ataagcttcagtgaaacagcaagagctgatgcagttcttggctacctgattgcattcttg
gtgcttctctccactgtgaaactgtggcatctgctgaggctcaaccctaaactgaacatg
atcacttcgacactaaggagggcatggggtgatatctctggattcatcactgttattgca
attatgttccttgcctattccattgctgcaaacctgatatttggctggaagctctactct
tacaaaactctctttgattcggcagagaccatggtcagtcttcagctgggaatcttcaac
tatgaggaggtcttggactacaatccaattttaggctccttcttgattggatcctgcatc
atttttatgacatttgtggtactgaatctgttcatttcagtgattctggttgcttttagt
gaggagcagaagcattaccaggcttcagaagaagaggagattgttgatctaatgttaatg
aaaatcttcagtttctttgggataaaatgcaagaaggaagagaagccggtcactggcgaa
caactggaacaacctgtcagcgagtga
DBGET
integrated database retrieval system
