Sylvia atricapilla (blackcap): 136366356
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Entry
136366356 CDS
T10263
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
136366356 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sati01007
]
136366356 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136366356 (KARS1)
Enzymes [BR:
sati01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
136366356 (KARS1)
Amino acid related enzymes [BR:
sati01007
]
Aminoacyl-tRNA synthetase
Class II (A)
136366356 (KARS1)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
136366356 (KARS1)
Prokaryotic type
Other AARSs
136366356 (KARS1)
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TRM10_TRM10A
Motif
Other DBs
NCBI-GeneID:
136366356
NCBI-ProteinID:
XP_066183434
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All DBs
Position
12:complement(62912..71404)
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AA seq
584 aa
AA seq
DB search
MEAAAGECNAAEIESHISKNELKRRLKAERKTAEKEAKQKEQSEKHLNKPSFTSEDNVGT
DEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNITV
RVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGVEG
NPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFIT
RAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKM
LVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHIT
GSYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVQFPSTECFETEETRRFFDNL
CVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERF
ELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAG
WGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSKKEAQPAEGTSV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcggcgggcgaatgcaacgcggcggagattgagtcgcacatcagcaaaaat
gagctgaagagacgtttaaaggctgagagaaaaacagctgaaaaagaagcaaagcagaaa
gagcaaagtgaaaagcatttaaataagccttcctttacttctgaagataatgttggtact
gatgaggagagcttggatccaaatcaatactacaagatccgtagccatgcagtccaacag
cttaagggctccagtgaagatccctatccccacaagttccatgttgacttatctctctcg
gattttatagacaagtacagtcacctgcagccaggagatcacctgacaaacattacagtg
agagttgcaggtcgaatccatgcaaagcgtgctgctggagggaaactgattttctatgat
cttcgcggtgaaggagtcaagttgcaggtcatggcaaattccagcctctacaaatccgag
gaagaatatttccgtgttaacagcaagctgcgtcgtggggacattattggtgtagagggc
aatcctgggaaaacaaggaaaggggaactgagtattattccttatgaaatcactctcttg
tctccatgcctgcacatgttgcctcatcttcattttggcctcaaagataaggaaacgaga
tatcgtcagagatacttggatttaattcttaatgattatgtgagacagaaatttataact
cgtgcaaagatcatcacttaccttcgtagctttctagatgagttgggctttcttgaggtt
gaaactcctatgatgaatgtaattccgggcggagctgtggcaaaaccatttatcacatac
cacaatgaactggatatgaatttatatatgagaattgctccagaactttaccataagatg
ttggtggtcggtggtctggacagggtatatgaaattgggcgtcagttccggaatgaagga
attgatttgactcacaaccctgagttcacaacttgtgaattttatatggcttatgcagac
taccatgacttaatggaaattacagagaagttgctttcagggatggtgaaacatattact
gggagttacaagattacttaccatccagatggtcaagatggacaggcctatgagatagat
tttactcctcccttccggcgaattagcatggtgtatgatctggaaaaggtcctaggagtg
cagtttccatcaactgagtgttttgaaactgaagaaactcgcaggttctttgataacctt
tgtgtggagagaaatgttgaatgtccacctcctaggacaacagccaggcttcttgacaaa
ttagttggtgaattcctggaagtcacttgtatcaaccccacattcatctgtgatcaccca
caggtcatgagtccgcttgccaaatggcatcgctctcttccgggactaacagaacgcttt
gaactctttgtaatgaagaaggaagtgtgtaatgcgtacacagaacttaatgatcctttc
cggcagcgtcaactgtttgaagatcaggccaaggcaaaagctgcaggtgatgatgaagcc
atgtttattgatgaaaacttctgcaccgcactggagtatggtcttcctcctacagctggc
tggggcatgggaattgatcgcttgaccatgttccttacagattccaataacatcaaggag
gtgctgctcttccccgccatgaaaccagaggacagcaagaaggaggcgcagcccgccgag
ggcacttctgtgtga
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