Sylvia atricapilla (blackcap): 136366388
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Entry
136366388 CDS
T10263
Symbol
CDH1
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04371
Apelin signaling pathway
sati04514
Cell adhesion molecules
sati04520
Adherens junction
sati05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
136366388 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
136366388 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
136366388 (CDH1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
136366388 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136366388 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136366388 (CDH1)
04090 CD molecules [BR:
sati04090
]
136366388 (CDH1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
136366388 (CDH1)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Major cadherins
136366388 (CDH1)
CD molecules [BR:
sati04090
]
Proteins
136366388 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TraK_N
Motif
Other DBs
NCBI-GeneID:
136366388
NCBI-ProteinID:
XP_066183499
LinkDB
All DBs
Position
12:complement(1034355..1042883)
Genome browser
AA seq
915 aa
AA seq
DB search
MGRRAGCLVPLCLLLLQVSHGMGRQDPAWDPAETLPGAAGPCSGPCPVLRSLSGQCGHGA
ASCRRGFTSGTFALTVPRDSVEAGQALGRVSFEDCGELRRSALLPDDRRFKVSRDGTISA
TRPLQLQQREITFSVHAWDNVGKKHSARVTLHRRRRHQRQHDKQMQQDTVPDVLIFPEHE
RGLRRQKRDWVIPPINCPENERGPFPKNLVQIKSNKDKETKVFYSITGQGADTIPVGVFI
IERETGWLKVTKPLDREKKDKYVLYSHAVSANGQPVEDPMEIIITVTDQNDNAPQFTQQV
FVGYIEENAKPGTSVMTVNATDADDAVNVNNGIVAYSILSEEPKGAQPMFTIDAEKGIIS
VIGTGLDRETTPNYTLIIQAADMEGMGLTNTATAIIKVTDANDNPPVFNPTMYEDSVDEN
EAGVLVARLYVTDQDLPGSPAWNAVYRIQSGDPQGEFEITTDPKTNDGLLKTAKGLDYET
QRRYTLVVSVENEVPFTVNINPATATVLVLVRDVNEAPIFIPPVKQVQVMEDVPKGYQVT
SYTAQDPDKDQSQKITYRMGSDPAGWLAIDPENGIVTAAQPLDRESAHAFNSTYKAIILA
VDNGSPHDATGTGTLVLLLQDVNDNGPVPEPRSFDICSRQPEEQRLKIIDKDLPPNTHPF
KAELMHGSSSNWTVQLENPDHVVLRMKKELEPGEYSIFLKLLDNQNKEQITPVRAQVCSC
EGPAKNCERRAYISGGMGVPAILGILGGILALLILLLLLLLFVKRRKVVKEPLLPPEDDM
RDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIG
NFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGR
FRKLAELYGGGEEDD
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggggcggcgggcgggttgcttggtcccgctctgtctcctcctgctccaggtgagccac
ggaatggggcggcaggaccctgcctgggaccccgccgagaccctacccggggcagcggga
ccttgctcgggaccgtgcccggtgctaaggtctctctccgggcagtgcgggcatggggca
gcgtcctgccggcgcggcttcacctccgggacctttgctctgacggtgccgcgggacagc
gtggaggcgggacaggctctgggacgagtgagctttgaggactgtggtgagctgcgccgt
tccgccctcctcccggatgacaggcgcttcaaggtgagcagggatggcaccatctctgcc
actcggcccctgcaactccagcagcgggagatcacctttagtgtgcacgcctgggacaac
gtgggcaaaaagcattcagccagggtgaccctgcaccgccgccggcggcaccagcgccag
cacgacaagcagatgcagcaggacacagtgcccgatgtgctgatcttcccggagcatgag
cgcggcctccggaggcagaagagggactgggtcatcccccccatcaactgccctgagaat
gagcgagggccattccccaagaacctggtgcagatcaaatccaacaaggacaaggagacc
aaggttttctacagcatcacggggcagggagcagacaccatccctgtgggtgtcttcatc
atcgagcgggagacggggtggctgaaggtgacaaaacccctggatcgtgagaagaaggat
aaatatgtgctctactcccacgctgtgtcagccaacgggcagcccgtggaggaccccatg
gagatcatcatcactgtcactgatcagaatgacaacgcgccccagttcacccagcaagtt
tttgtcggctacattgaggagaacgcaaagccaggcacatctgtgatgaccgtgaatgct
acggatgcagatgatgcggtcaatgtgaacaatggcatcgttgcctactccatcctcagc
gaggagcccaagggtgcccagcccatgttcaccatcgatgccgagaagggcatcatcagt
gtcattggcacaggactggaccgggagaccactcccaactacacgctgatcatccaggct
gcagacatggagggcatgggcctgaccaacactgccaccgccatcatcaaagtcactgat
gccaatgacaatcctcctgtcttcaaccccaccatgtatgaggactcagtggatgagaat
gaggcgggagtgctggttgcccggctatatgtgacagaccaggacctgccaggctcacca
gcctggaacgccgtctaccgcatccagagcggagacccgcagggtgaatttgagatcacc
actgaccccaaaactaacgatgggctcctgaaaactgccaagggcctggattatgagacc
cagaggcggtacacgctcgtggtgtcagtggagaacgaggtccccttcaccgtgaacatc
aatcctgccacagccactgtcctggtgctggtcagggacgtgaacgaagcccccatcttc
atacccccagtcaagcaggtgcaggtgatggaggatgtgccaaagggataccaggtcacc
tcctacacagcccaggaccccgacaaggaccagagccagaaaataacgtatcgcatgggc
agcgaccctgcggggtggttggccattgaccctgagaacggcatcgtcacggcagcccag
ccactggaccgggagtcggcacatgccttcaacagcacctacaaggccatcatcttggcc
gtggacaatgggtcaccacatgatgccaccggcacggggacgctcgtcctcctgcttcag
gatgtgaatgacaatgggcccgtgccagagccccggagctttgacatctgcagccggcag
cctgaggagcagaggctgaagatcatcgacaaggacctgccccccaacacccaccccttc
aaggcagagctgatgcatggctccagcagcaactggactgtccaactggagaatccagac
catgtggtgctgaggatgaagaaggagctggagccaggcgagtacagtatcttcctgaag
ctgctggataatcagaacaaggagcagatcacgccggtgcgagcccaggtctgcagctgt
gaggggccagccaagaactgtgagcggcgagcgtacatctctggtggcatgggtgtgcct
gccatcctgggcatcctggggggcatcctggcactgctcatcctcctgctgctgctgctg
ctcttcgtaaagaggaggaaggtggtgaaggaaccactgctcccacccgaggatgacatg
agggacaacgtgtaccactatgacgaggagggtggtggcgaggaggaccaggactatgac
ctgagccagctgcaccgggggctggacgcgcggcccgaggtgatccgcaatgacgtggcc
cctccactcatggcggccccccagtaccgaccccgccccgccaaccccgacgagatcggc
aacttcatcgacgagaacctgaaggcggccgacactgaccccacggcccctccctatgac
tcgctgctggtgtttgactacgagggcagcggctcggaggccacctcgctcagctccctc
aactcctccgcctccgacggcgaccaggactacgactacctcaacgactggggcggccgc
ttccgcaagctggccgagctctacggcggcggcgaggaggacgattag
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