Sylvia atricapilla (blackcap): 136366511 Help Entry 136366511         CDS       T10263                                  Symbol NLRC5 Name (RefSeq) protein NLRC5   KO K22615   NLR family CARD domain containing 5 Organism sati  Sylvia atricapilla (blackcap) Brite KEGG Orthology (KO) [BR:sati00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:sati04054]     136366511 (NLRC5) Pattern recognition receptors [BR:sati04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    136366511 (NLRC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_6 NACHT Atypical_Card LRR_4 NLRC4_HD2 LRR_8 NPHP3_N AAA AAA_16 AAA_22 AAA_19 NOD2_WH RNA_helicase nSTAND3 ATPase_2 AAA_30 Motif Other DBs NCBI-GeneID:  136366511 NCBI-ProteinID:  XP_066183700 LinkDB All DBs Position 12:6938196..6970641 Genome browser AA seq 1901 aa AA seqDB search MSVCVPSVCLQQIDSLSGYGAEATFALDSWKETDYTTMQPPFQLDDPDLQASVARARPQL VEFLSRCPDWLFSISQQFIPQGTLGSLAGITDPREKTSVLLDLLEQAGPAAWKHFAQSVC MEYDLPLDLEVLLMSSAGEGNFSQTEEAGRDTRLQSPVLKGSARRRRHSSSGSDKEAKQR RLDSSLKYRHLLINSIRQRYGSRREAEAQAQTQPLPFNQAFVNVVIHQSKAPRLKERAEK PREDVAGAPEPEECADTAVKVSDLLCREAPANTTKVIFLFGKPGTGKTRLMHRICQKWAE GVLSQFLFTFLFEFRQLNLLKRKLTLKELLFDVFLEPEDSPDAVFEGLLENAQQTLIIFD GLDEFAANMDVSLSSKRDPALTSPMSISQLFAELCHGKLLPGCTVLVTSRPKRLPDFLLY TVGVLAEIWGFDHQKVEEYVGHYFRQHSFRERAIAHVKNNTKLLSMCLIPALCNIVCICL EYLLLKHQMSVELPQTMTQFYIKMFLIFLNKQQGDSAGEEETQLNYNKKAIFGLLDLALR GLEEKKLVFYEGDIPEDVKEFASLHGLLTVFEVKTSSSSPEVGYAFVHLSLQEFFAALCL MVSQRVEKNYLKKKFFLKSKWTLKNETKTEFMESFHIFLSGLSSRECRTFLMLLAEQDEA WVQEKQEVILQSLKKLAATHLSGPKVLELCHCTFETQNLEVAQHIGNLLNFKYEFKNIRL TTLDMSALVFVINLGQDLIYLDFAGCLVDTDCLEVLAGCKNMEHLSFRSRRCGDDFAAAL SKGLQGMGSLKKLELTGGSITAEGMTNLVQAASQCLQLEEINLQGNRIRDPEGKTVMDLF SKIETLKKVDLSNNHLSLNAVLSLAKEGLVCQNVTELCARSESSSKSKVDTIIIYFSGSS GKAQRSLDLKLDEDKEHATPTRHVNLCLQDHRLSFQHAKTIVAILQSCPCLSEVDLSGNR LGDEGCSCLLESLPCIPISRQLNLSQNCLSVTGVCSLLKSVNSCQKVMEVQVSLCHDTAV LRFREDTEFASLPPREEPLFSTDHQHEEENQTPTTSQKIRLTECNFQANELKNLCAVLKE CGHISELDLSCNYLGDEGLLQLFQCLPKLKMLRSLKFNDNQISLNSVFFLAQSLATLEHI KTVSLSLGHTQVVHLTFWERVRSTSRWRSGSLAHPQQEEKGRCFSLRDCRVSLEDVTRLC QILARCPQLTELDLSGNSLSDQSIETLLNFLPSFCHLTLLSIRKNSLSPHCAVFLLNSIN LCQRIRVVEVWSSENAFLHLGASLQSQRTSCRLTGCALGEGQVEELCNILEQHGWPAEVD LSRNQLGDEGLRCLLDHLHRVPGTCSLNLSHNGISQDGVLHLINAFVTSGNTTEVQVSLC SKATLIIKLTREDDPRKILRLAECNFQPEHLEKLFLLLEKCTGLTEYTSSNNNMTVQAAE RLLHSLRKDLGLLKISIEEPWVCRERVMNLLELAVQASGNITEITICKDKTLFQLVTRFP HCLEKTESVISRLNLYKPEIKHSFCQRLCEKCAQLQELRWSHVELHEDEAEMLVRILLPL PELKTFGLTSSSVAPTGIDYLISGLQNCQAIEELNLAYMKLSSAAIPELVLGLCEMPSLK RLILNHNSIGDDGCSRLAEALRKMHNMEEINLSHNEITDPGLINLADALLEIQKLQKINL SGNCPSPTGGEKLMEALAHCKHIKELLLSRNGFGDRTAATLALCLPHMTNLRILDFQNNE VGQAGGLELARALVVCELLEEISLSENDLGEQSVHALSKGLPYLKHLRKIDLKFCGITDD ASKWLSLGFRQCPSLEEIIMSWNALGDGGAQELAIALPKMEKLKVLDLEKNHIGACGATK LAEELAKCPEIQFIRLWDNPVPRGLAESLTSQDPRLCFSFN NT seq 5706 nt NT seq  +upstreamnt  +downstreamnt atgtctgtctgtgtgccatctgtctgcctccagcagatcgattctctgtcaggatatgga gcagaagccacctttgcacttgatagttggaaggagactgattacacaacaatgcagccc ccattccagcttgacgatccagacctgcaagcatctgtagccagagcccgcccccagctc gtggaattcctcagccgctgtcccgactggctgttctccatttcccagcaattcatcccc caggggaccctgggcagcctggctggcatcactgaccccagagaaaaaacctcagtgctc cttgacctgctggagcaggctggtcctgctgcctggaaacactttgcacagtctgtctgc atggagtatgacctgcccctggacctggaggtcctgctcatgagctctgcaggagaaggt aatttcagccagacagaagaagcaggcagagatacaagactccagtcacctgtgctgaaa gggtctgctcgccgtcgccgtcacagcagctctgggagtgacaaggaggccaaacagcga cgactggattcatctctgaagtaccggcacctcctcatcaattccatccgccagagatat ggaagcaggagagaagcagaagcacaggcacagacacagccactgcctttcaaccaagcc tttgtcaacgttgtcattcatcagagcaaagccccccgcttaaaagagagagcagagaaa ccccgagaggacgtggcaggagctcctgagccagaagaatgtgcagatacagctgtgaag gtgtcagatctgctctgtagggaggccccagcaaacacgacgaaggtgatctttttgttt ggtaaaccaggtacaggcaagaccaggctaatgcacaggatttgtcagaaatgggcagaa ggtgtcctttctcagtttctcttcactttcctcttcgagtttcggcagctgaatttatta aaaagaaaactgaccctgaaggagcttttgtttgacgtgttccttgagccagaggacagc cctgatgcagtgtttgagggcctcctggagaatgcccagcagacactgatcatctttgat gggctggatgagtttgcagctaacatggatgtgtcactgtcctctaagagagacccagct cttacctcccctatgtccatatcccagctctttgcagagctctgccacgggaagctcctg cctggttgcacagtgttggtcaccagccgacctaagaggctgcctgacttcttattatac acagtaggtgtgttggcagaaatttggggatttgaccatcagaaggttgaggaatatgtt ggccactattttcgtcagcattccttcagagaacgagctattgctcacgtgaagaacaac accaaactgctcagcatgtgcctcatccctgctctgtgtaacattgtctgcatctgcttg gagtatttgctcctgaaacaccagatgagtgtggagcttcctcagactatgacacagttt tatatcaaaatgtttctcatcttcctaaacaagcagcaaggagactctgcaggtgaggag gagactcagctgaactataacaaaaaggccatttttggtctgcttgatcttgcactgaga ggcctggaagagaagaaactcgtattttatgagggtgatattcccgaggacgtgaaggaa tttgcttccttgcatggattgctgactgtctttgaggtgaagacaagtagctcttcccca gaggttggctatgcctttgtgcacctgagcttgcaggagttttttgcagcactgtgtctc atggtgagtcagagggtggagaagaactacttgaagaaaaagttcttcttgaagtcaaag tggactttaaagaatgagacaaagactgagtttatggagagttttcacatatttctctca ggcttgtcgtcaagagagtgtaggacatttctcatgctgctggcagaacaagatgaagct tgggtgcaggaaaagcaggaggtgatcctgcagtctctcaagaaactggcagccactcat ctgtcagggcctaaggtccttgagctctgccactgcacctttgaaacacaaaaccttgaa gtagcccagcacattgggaacctgctgaatttcaagtatgagtttaaaaacatcagactg acaacgctggacatgtcagctttggtttttgtcataaacttggggcaggatttgatttat ttggattttgcaggatgtcttgtggacactgactgtttggaagttctggctggctgtaaa aatatggaacacttgagctttcgtagcaggagatgtggtgatgactttgcggctgctctt tcaaagggcttacaaggaatggggagcctgaagaaactagagttgacaggagggagcatc acagctgaggggatgactaacttggtccaggctgcatcacagtgcctccagctggaagaa ataaatttgcagggcaaccggatccgggatccagaggggaagacggtgatggatctgttt tccaaaattgaaacgctgaagaaagtagacctgagcaacaaccatctttccttgaatgct gttctcagtttggcaaaggaaggcctcgtgtgtcaaaatgttactgaactgtgtgccagg tctgagagctcttccaaaagcaaggtggacaccattattatttatttttctggctcatct gggaaagctcaaagatctttggatttgaagttggacgaggataaagaacatgcaactcca accagacacgtgaatttatgcttgcaggatcacaggctgtctttccaacatgccaagacg attgtggccattctccagagctgtccctgtctctctgaagtggatttatcaggaaacagg cttggagatgaaggctgcagttgtctgctggaaagcctcccctgtataccaatttcaagg cagctgaatctcagtcaaaactgcctctctgtcactggcgtttgcagcctgctgaagtca gtaaatagctgccagaaggtgatggaggtgcaggtcagcctttgtcatgatactgcagtc ctgaggtttagagaagacacagagtttgcttcccttcctcctagggaagagcctctgttc tctactgatcaccaacatgaggaggaaaaccagacacctactacctcccaaaaaataaga ctgacagaatgtaattttcaagccaatgagctgaagaatctgtgtgcagtgctgaaggaa tgtggccacatctccgagctggacctatcatgtaattatctgggagatgagggacttttg cagctgtttcagtgcctccccaaactgaaaatgttacgttctctcaagtttaacgacaac cagatctccctgaactctgtgtttttcttagctcagtcattagctacactggaacacatt aaaacagtgagcctcagcttagggcacacacaggtggttcatctgaccttttgggaaaga gtcagaagtaccagcagatggagaagtggttccttggcacatccccagcaggaagaaaaa gggcggtgctttagtctcagggactgcagagtgagtctggaggatgtgaccaggctgtgc cagatactggctcgatgtccccagctgacagaattggatctgtctggaaattcattgagt gaccagagcattgagacattactgaactttctgccatccttctgtcatctgacactactg agcattaggaaaaactccttgtccccacattgtgctgtttttctcctcaactccatcaac ctctgccagcggatcagagtggtggaagtctggtcaagtgaaaatgccttcttgcattta ggagcaagcctgcaaagccaaaggacatcctgcaggctgacaggctgtgccctcggggaa gggcaggtagaggagctctgcaacatcctggagcagcacgggtggccagcagaagtagac ctctccaggaatcagctgggagatgaaggcctgaggtgcctcttggaccacttgcatcga gtgcctggtacctgttccctcaacctcagccataatgggatttctcaggatggtgtccta catctcataaatgcctttgtcacatccggaaacaccactgaagttcaagtcagtctgtgc tccaaagcaactttaatcatcaagctgacaagagaagatgacccaagaaagattttgaga ctggcagagtgcaactttcagccagagcacttggagaagttgttcttgctcctggaaaag tgcactggtctgacggagtacacgtcctcaaataacaacatgacagtccaagctgcagaa agacttttgcattccctgaggaaagatctggggctgctgaaaatcagcatagaagagcca tgggtgtgcagggagagagtcatgaaccttctggagctggctgtccaggcctctggaaac attactgagatcacgatatgtaaagataaaaccctcttccaattagtcacaagattccca cactgcctggagaagacagaatcagtcattagcagactgaatctgtacaagccagaaatc aagcactccttctgccaaaggctttgtgaaaaatgtgctcagcttcaggagctgagatgg tctcacgtggaactccacgaggatgaagcagaaatgctagtcaggattttgctacccctc ccagagctgaaaacgtttgggctgacctctagcagtgttgcaccaactggaatcgattat ttgatctcaggcttgcagaattgccaggccattgaagaactaaacctggcctacatgaaa ctcagcagtgctgccatccctgagcttgtgctggggctctgtgagatgccatccctgaaa aggctgatcttgaaccacaacagtattggtgatgatggctgctccagactggcagaagcc ttgaggaaaatgcacaacatggaggaaatcaatttaagccacaacgagattacagatcca ggcctgataaatcttgctgatgccctgctggaaatccaaaagctgcagaaaatcaacctt tcagggaactgtcctagtcccactggaggggaaaagctgatggaagctcttgcccattgc aagcacatcaaggagttactattatcaaggaatggttttggagacaggacagcagcgaca cttgccctctgtctgcctcacatgaccaacctgaggatcctggacttccagaacaatgag gttgggcaggcaggagggctggagctggccagagccctggtggtgtgtgagctgctggaa gagataagtttatcagaaaatgaccttggggaacagagtgtccatgccctgtccaagggg ctgccatacctcaaacacctccggaagatcgacttgaaattctgtggaatcactgatgat gcttcaaaatggctctctctgggcttccgacagtgcccttccctggaggagataataatg tcttggaatgcccttggagatggaggagcccaagagctggccattgcgctcccaaagatg gaaaagctgaaggtgttagacctggagaaaaaccacattggagcctgtggggccacaaag ctggcagaggaacttgccaagtgcccagaaattcagttcataaggctgtgggacaatcca gtgcccaggggccttgctgagagtttgacaagccaagacccaagactgtgtttctccttc aactag

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