Sylvia atricapilla (blackcap): 136366604
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Entry
136366604 CDS
T10263
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04137
Mitophagy - animal
sati04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136366604 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
136366604 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136366604 (AMFR)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
136366604 (AMFR)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136366604 (AMFR)
Multi subunit type E3
ERAD complex
136366604 (AMFR)
LMBR1L-GP78-UBAC2 complex
136366604 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
136366604
NCBI-ProteinID:
XP_066183892
LinkDB
All DBs
Position
12:8660669..8689016
Genome browser
AA seq
630 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTALSALALLGAGLSAYRALSQAPGEAAGTEAAESQRCAGPRAL
DVAYYLLSDSLCVWVLVNTACCFLMLVAKLIQCMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLALLI
AMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQ
DTSCPTCRMSLNITDSHHVREDHQRENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTD
NILEGRIQVPFPTQRADSIRPALNNSVERHSTDQEDTGTVTQTERVPLELNSRLEEMVEF
NEMEAEPSGAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKP
LPEGAADAVTLRRRTLAAAAERRLQMQQNS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctggagcgcttcccctggcccagcctccgcacttacacggcgctc
agcgccctggcgctgctgggcgccggcctcagcgcctaccgcgccctcagccaggcgccc
ggcgaggcggcgggcaccgaggcggccgagtctcagcgctgcgccggcccacgggccctg
gacgtcgcctactacctgctctccgacagcctctgcgtctgggtactagtgaatactgcc
tgctgttttctgatgctggttgctaagctaatccagtgtatggtgtttggtcctcttcgt
gtcagcgagaggcagcatctcaaggataaattctggaatttcattttctacaagttcatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtagtgatgtggtgcctctgg
ttctctggacttgtgtttctccatctgatggttcagctctgcaaggatcgctttgaatat
ctttccttttctcctaccacacccatgagcagccacgtcagagtgctggccctgctcata
gccatgctcctgtcttgctgtggattagcagttgtctgtggagttgttggctatacccat
ggcatgcacacattggctttcatggcagcagagtctctgctggtgacagtcagaactgct
catgtgattttacgatatgtagttcatctctgggatctcaaccatgaaggaacgtgggag
ggcaaaggcacttacgtctactacacagattttgttatggagctgaccttgctttccctg
gacttgatgcatcatattcatatgctgttgtttggcaatatctggctgtcaatggcgagc
ctggtgattttcatgcagctgcgctacctgttccacgaggtgcagcggcgaatccggcgg
cacaagaactacctgcgtgtggttggaaacatggaagccaggtttgcagttgcaacacca
gaggagctggcagtgaacaatgatgactgtgccatttgctgggactccatgcaatccgca
cgtaaactcccctgtggccaccttttccacaactcctgcctgcggtcctggctggaacaa
gacacatcttgccccacctgcagaatgtctcttaatatcactgacagccatcacgtgagg
gaggatcaccaaagggagaatctggatgagaacctagtccctgtggcagcagcagaaggc
agaccacgcctgaaccagcacaatcacttcttccactttgacggctccagaattgccagc
tggctgcccagtttttctgtggaagtgatgcacaccaccaacatccttggaattgcacaa
gccagcaactcccagctcaatgttatggcccatcagattcaggagatgttccctcaggtt
ccttatcatttagttctgcaggatctgcagctaactcgttctgtggagatcaccactgac
aacatcctagaagggcgcatccaggtgcctttccccacacagcgtgcagatagcattaga
cctgcattgaacaactctgtggaaaggcacagtactgatcaggaggatactggaactgtc
acacagactgagagagtgccacttgaactgaactccagactggaagaaatggtggaattc
aatgagatggaagcagaacccagtggagcagaagattttgaggccaggggaagtcgcttt
tccaagtcagccgatgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcaa
caagctcgaaagcgttacttaaacaaaacctccgatgaggagctgagcacagagaagcct
ttgcccgagggagctgccgacgccgtcaccctgcgccgcaggaccctcgctgctgccgct
gaacggagacttcagatgcagcaaaactcttag
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