Sylvia atricapilla (blackcap): 136366645
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Entry
136366645 CDS
T10263
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sati Sylvia atricapilla (blackcap)
Brite
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
136366645 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136366645
NCBI-ProteinID:
XP_066183964
LinkDB
All DBs
Position
12:complement(11369327..11446736)
Genome browser
AA seq
2893 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVSQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSTFQMLHSAHPQGNFSSSKLSPVNINFSAS
TSSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHISPQQVTPSSSELVRPPSQTQTHPWHSSVSNQHLQGRSRATSQGQ
PPSKKTDGSGSYTKLQNTQVRTMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAAKVSV
KVKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEVSAGMTVDTEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVS
LCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRI
VRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKV
LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEVESESEEKPKLRRPCDRSNGYGRTECFRVEKNL
LVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTED
GRTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKH
HCNKVLLRVRMLYYLKQEVIGSEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKS
LLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPA
LFKDDIEDDVSSPGDLVIADGEGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQ
QIQPTFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERG
RFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERAS
RTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRT
DYHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAF
EDTKAKNENLKEDPQSSEEESMSTEETQTILKSEPLSPKNGTPIQITDHRPSVKTETDRR
MVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESV
ASLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKW
PSARRSYDSTTVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYEQSPQLSKVKKHV
REKEFTVKINDEGGLKLTFQKQGLSQKRPFESEECALGQQQYLARLRELQNASETSLVNF
PKSLPKSGTSSHLTASANGVIADSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGIN
SCQVAAGINPALTYTQSQVMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYV
EDSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPL
KDLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFERILTGPVVREEVSRRGRRPKSEIAK
ATAAAAAASAASASLNPLLANGLLPGVDLPSLQALQHNLQNLQSLQVTAGLMGMPAGLAA
GGDAKNVAAMFPMLLSGMAGLPNLLGMGGLLTKSTESASEEKKGNDSKETDTKKERTEDQ
NTDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIF
DVQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDST
SSSSEDSDSSDED
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaagtcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattc
aattgttcaccagtccatccgcaaaaccagtccaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtcccct
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcgttacggccgcagcag
agcaggaacaacacggggcaggatgctctgagccagccaaaagacttcatggaagttaac
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcaaca
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccgtgttctgtc
agtaatagtcaacaattttcatctccgtattcctactctaataatcacatttctcctacc
agccttcttcagcctacaacagctctttcgaccagccagcagacacactctatctctgac
ttcactggaagtgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgctgaatcctaacacacctttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaatttttcagcttcc
actagttctgcttctcagataagccatttcactgaccctatagaaagcaacggttttaca
tctttagatgacaacttacttcatcaagtggagacccacagtgaaccattcacaggactt
gacccggatgacctcctgcaggaagaccttctgccacagttcgatgactctgcatttgtt
caggatagcacaagccatgttttagagcatgacctggaacaccacatcagcccacagcaa
gtgactccgtcgtcatccgaactcgttcggccaccgtctcaaactcagacccatccttgg
cattcttcagtttctaatcagcacctgcaaggcagaagtcgtgcaacttcacaaggacag
cctccttccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtg
aggacaatgtctgaaaagaagcagaagaaaaaaacagactcagaaagtaaacaagagaag
gcgaatcgcataatatctgaagcaattgcaaaggcaaaagagagaggagagagaaacatt
ccaagagtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aaggggagaaaagttaaatccaaaccaaaggataaggagagcaaaaagccgaaaactggt
tcctcatccaaaattaaagagaaaacaaaaattggaaaactgatcatcacactgggcaaa
aagcagaaaaggaaaaacgaatcttcagatgagttgtctgatgctaagcagaccccacag
cggccactgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaa
aaatacgctgaagaaggagaagggaaacaatcagaagaagaagcagctaaagtttctgtg
aaagtcaagaagaattctgcccctttacctgctgaacagcctttacaattatttgtggaa
aatccaagcgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaag
aaagaagtatctgctgggatgacagtagacacagaagagttttttgtaaaatacaagaac
tactcatatctccactgtgagtgggccacagaacaacagcttttaaaagataaaagaatc
cagcagaaaataaagcgattcaaagtaaggaaagctcagagagctcacttttttgcagat
atggaagaggagccttttaatcctgactatgttgaagtagaccgggtattagaagtgtct
ctttgtgaagataaagacactggtgagcctgttatttactatttagtaaaatggtgttcg
ttgccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaa
gaatttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctcca
aactcctggaagaagattgagcagtccagggaatataaaaatggcaatcagctcagggaa
tatcaactggaaggacttaactggctcctattcaactggtacaataggcggaattgcatt
ttagccgatgaaatgggccttggcaaaaccattcagtccataacattcctgtatgaaatc
ctgctgactggtataaggggccctttcctgatcatagctccgctttccaccatagcgaac
tgggagagggaattccgcacgtggactgacctgaatgttgtggtgtaccacggcagcatg
atcagcaggcagatgattcagcagtatgagatgtacttcagggactcccagggccgtatt
gttcgaggtacctacaggttccaagccattatcacaacttttgaaatgattcttggtggg
tgtccagaattaaatgcaattgagtggcggtgtgttattattgatgaagctcacagactg
aagaacaaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtg
ctgttaacaggtactccactgcagaacacagtagaagaattatttagcctccttcatttt
ctggaaccattgcgttttcctgctgaatctacgttcatgcaagagtttggagaccttaaa
actgaggagcaggttcagaaactacaagctatcctgaaacccatgatgctcaggagatta
aaagaagatgtagaaaaaaagctggctcctaaggaggaaaccataattgaagtagaacta
actaatattcagaagaaatattaccgagccattttggagaaaaattttgctttcttatcc
aaaggagcagggcaggcgaatgtccccaatctggttaacactatgatggaactcagaaag
tgttgtaatcacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaa
gaaacttacaatccaagtgctcctgacttccacctgcaagcaatgatccaatctgctggt
aaattggttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtcctt
atcttctctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaagg
tacctgtacgagcgcatcgacgggcgcgtgcgggggaacctccggcaggcggccatcgac
cgcttcagcaaaccagactcggatcgcttcgtcttcctcctctgcaccagggctgggggc
ctgggcatcaacctgactgcagcagacacctgcatcatctttgattccgactggaatccc
caaaatgacctgcaggctcaagcccgatgccacaggattggtcagaacaaagcagtgaag
gtctacaggctgatcacacgtaattcctatgagagagagatgtttgacagagcaagtctg
aaactgggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggt
ggtatccaacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcctatggt
gccattatggatgaggaggatgaaggctccaagttctgtgaggaggacattgaccagatc
ctgcagcgtcggaccaaaaccatcacgattgagtccgagggaagaggctccacgtttgcc
aaggctagttttgttgcatctggaaacaggactgatatttcactagatgatcccaatttc
tggcagaaatgggccaaaaaagcagaaatagatattgatgctatcagtggtagaaacagc
cttgttattgataccccaaggatcaggaagcaaacacggcccttcagtgccacaaaagat
gagctggcagagttgtctgaggtggagagtgagagtgaagaaaaaccaaagctccgccgg
ccgtgcgaccgttccaatggctacggaaggacggagtgcttccgtgtggagaagaacttg
ctggtctatgggtggggtcggtggagagaaattctgtcccatggtcgcttcaagaggcag
ctgaatgaacacgatgtggagatcatttgccgagccctgttagcctattgtcttgttcac
tacagaggggatgagaaaataaagagttttatatgggatctcatcaccccaacagaggat
gggcgaacacgagaattacagaaccaccttggcttatcagcccctgtgcctagaggaaga
aaagggaaaaaagtgaaaacccaagctagcacttttgatatacacaaagcagaatggctt
cgaaaatacaatccagaacatctgttgcaagatgaagggtacaagaagcacataaaacac
cattgcaacaaggtcttacttcgagtaagaatgctctattacttaaaacaagaagtcatt
ggtagtgaattccaaaaagtctttgatggaactgatgccagtgaaattgatgtttgggtt
cctgagccagaccactctgaagttcctgctgagtggtgggatgcagatgcagataaatct
cttctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagaccca
gctctttgcttcttggaaagggttggaaaaccagatgacaaagcagttgctgctgaacag
agagcaaatgattatatggatggggatgtagaagatccagaatataaaccagcaccagca
ctgtttaaggatgacatagaggatgatgtttcatccccaggtgatctcgtaatagcagat
ggagagggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaaca
acgcgtctgcgccgcctgataacagcttatcaacggacgagtaaaaacaggcaggcccag
cagatccagccaacattcccagtacaaaccagtatgatgcagcttccatatgaagaagct
gcactgaatccaaagatggctgctaagattgaaagacagcaaagatggacaagaagagaa
gaagctgacttttacagagttgtgtccacgtttggagtggtgtttgaccctgaaagagga
cggtttgattggaccaagtttcgagcgatggctcgtctgcacaagaaaactgatgagagc
ttggagaagtacctgtatgcatttatgtcaatgtgcaggagggtctgtcgtctcccctca
aaagaagaactcgtggacccaaacctttttatccagcccatcacagaggaacgcgcttcc
cggactttgtaccgcatcgagctcctgcgcaaagtgcgagaacaggctctcagacacccc
cagctgtttgagcgactcaagctgtgccagccaaacccagacctacctgtctggtgggaa
tgtgggactcatgacagggatttacttattggagctgctaagcacggagttagcaggaca
gattatcatatccttcgtgatcctgagctctcgtttatgtctgcccagaggaactataat
caaaacaaagtggctctctcaaggacttctaccccactcttgcaccagtaccagatggca
ttatctgcttctcctcttacacctcagtcaagactgtcagatgctaaagtgaatgctttt
gaggacacaaaagctaaaaatgaaaatctcaaagaggaccctcagtcttctgaagaggaa
tctatgtctacagaggagacacagacaatactgaaatctgaacctttgagtcccaaaaat
ggcaccccaatacaaattacagaccacagacctagcgtgaagactgagacagacaggcgc
atggtggcagcaaggacagagcctctgactccaaacccagcttccaaaaaacagagagtc
agcaaaagggggtctgactctagctctgactcagactctgactcagatagatcatcctgt
tcttccaggtcatcatcttcatcctcttcgtcttcctcgtcttgttcccactctcgatct
ggctctagctcttcatcatcttcatcttgttcttcagcatcttcatcctcctcctcatcg
tcctcatcatcatcgtcgtcgtcatcatcatcgtctgaagagagtgatagtgatgaagag
gaggcacaaaaacgtgcagaaggaacgccacatataaaagcctatgatgaagagagtgtg
gcctctctgagcaccacacaagatgagacacaagacagtttccagatgaacaatgggaca
ccaaattccagttatctcctacaaggtggatacatgttggctgcatcctactggccaaag
gatcgagttatgattaacagactggacagcatttgtcagacagtgttgaagggtaaatgg
ccttcagcccgaaggagctacgacagcaccacagtggcatccttctacaccaccaaactc
ctggacagctcaggggcagctgcagagtacagtgagcccagtgcacccacaccccctctt
gcagctgtaaaagaagaatatgagcagtcaccccagctgtcaaaggtgaagaagcatgta
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcag
aagcagggactgtctcagaaaaggccatttgaaagcgaggagtgtgcattgggtcagcag
caatatctggctcggctccgtgaactccagaatgcttcagaaaccagccttgtcaacttc
cccaaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatggagtt
attgctgacagtcagcctgtagtcaaaaagagacgaggaaggaggaagaatgtggagggg
gttgatgttctctttatgaatagaaataaacagcctaaccatgttaatccaggtattaac
tcctgccaggttgctgcaggaataaacccagcactcacttacacacagtcccaagtcatg
cttgatgcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggt
gatgatgcccctaaaagaaaagatttagaaaggtggcttaaagagcatcctggatatgtt
gaagattcaggagcttgtatccctaggatgcagctgcacgatggaaggcccaaacaaaaa
agacaccggtgtcgaaaccccaataaactggatgtgaacagtttaactggtgaagaacgt
gttcagctcataaatagaagaaatgcaagaaaggttggaggtgcatttgctccccctctg
aaggatttgtgcaggttcttgaaagaaaatccagagtatggagtagctcctgagtgggga
gaagttgtaaaacagtctggcttcctccccgaaggaatgtttgagcgcatcctgacgggc
ccggtggtgcgggaggaggtgagccggcggggcaggcgccccaagagcgagatcgccaag
gccacggcggctgccgcggccgcctccgccgccagcgcctccctcaacccgctgctggcc
aacgggctgctcccgggcgtggacctgcccagcctgcaggccctgcagcacaacctgcag
aacctgcagtcgctgcaggtcacggcgggattgatgggaatgccggctggcctggctgcc
ggaggagacgccaagaacgtggctgccatgttccccatgctgctgtcagggatggctgga
ttaccaaacctgctgggcatgggaggactcctgacaaagtcgacagaatccgcgtcggag
gagaaaaagggaaacgattcgaaggagacggatacaaagaaagaaaggacagaagaccaa
aatacggatactggtggcgaaaactctgtttcgagttctccttcgacatcctctgccgcc
gcagctgccaatcctctctctcttaaccctttacttttgtccaacatactttacccaggg
atgcttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatattttt
gatgtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggag
gaaaattctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaac
gaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtaca
tcgtcttcatctgaggattcggattcaagcgatgaagactga
DBGET
integrated database retrieval system
