Sylvia atricapilla (blackcap): 136366670
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Entry
136366670 CDS
T10263
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04144
Endocytosis
Brite
Membrane trafficking [BR:
sati04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
136366670 (VPS35)
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Gene cluster
GFIT
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NCBI-GeneID:
136366670
NCBI-ProteinID:
XP_066184013
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Position
12:14243536..14267972
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaagctcctggatgaagccatt
caggctgtgaaggtgcagtccttccagatgaagagatgcttggacaagaacaagctgatg
gatgctctgaaacatgcttccaacatgcttggggagctgcggacttctatgttatctccc
aagagctattacgagctctacatggcaatttctgatgagctacactacttggaagtctac
ctgacagatgaatttgccaaaggcaggaaagtggcagacctttatgagctagtacagtat
gctggaaatatcattccaagactgtatctgctgataacagtaggtgttgtctatgtcaag
tcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtggagtg
cagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgactcaatg
gattttgtgctgctgaactttgctgagatgaacaaactgtgggtgcggatgcagcaccag
ggccacagtcgggacagagagaaaagggagcgcgagaggcaggagctgaggatcctcgtg
gggaccaacctggtccgcctcagccagctggaaggggttaatgtggagcgatacaagcag
attgtgctgcctggaatactggagcaagttgtgaactgtagagatgctttagctcaggag
tacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctgaac
ccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggcatcccagca
gatatcaaactgtttgatatcttttcacagcaggttgctactgttatacagtctcggcag
gatatgccctcagaggatgtggtgtctttgcaagtttctctcattaacctggctatgaaa
tgctacccagaccgtgtggactatgttgacaaggtgttggagactactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagtagtgctgtttcgaaggagctgactaga
cttttgaaaatcccagttgatacttacaacaatatcctgacagttctgaaactaaaacat
tttcacccactctttgaatactttgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtattggattataacacagaaattgtgtcccaagatcaggttgatgctatc
atgaatttggtatccacgctgatccaggatcagccagatcagcctgctgaagatcctgac
cctgaagactttgctgatgagcagagtcttgtgggaagattcattcatctgctgcgttct
gatgaccctgaccaacagtacctgatcctcaacacggcccggaagcactttggggcaggg
gggaaccagcgcattcgtttcacactgccacccttggtttttgctgcctaccagctcgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaagatc
ttctcgtttgctcatcagaccatcagtgctctgatcaaagcagagctggcagagctgcct
ctccgcctcttcctgcagggagcgctggctgcgggagagattggctttgagaatcatgaa
actgtggcctatgagttcatgtcccaggccttctcgctatatgaagatgaaatcagtgac
tcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaagtgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggcagcctccaaactc
ctcaagaagccagaccagtgccgagctgtgagcacttgtgcccatctcttctggtctggc
cgaaacactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaatgccta
aagaaggctctgaagatagcaaatcagtgcatggacccctctctgcaagtccagcttttc
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgagtctact
gaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgtctgagg
agggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttag
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