Sylvia atricapilla (blackcap): 136366690
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Entry
136366690 CDS
T10263
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
sati Sylvia atricapilla (blackcap)
Brite
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Cadherin related
136366690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136366690
NCBI-ProteinID:
XP_066184046
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Position
12:complement(16845119..16905256)
Genome browser
AA seq
2839 aa
AA seq
DB search
MGPRGARRAAGCLLLCWALAAARAAPRRTPSFDGHVAENRPAGTRVRGLSIPLTRLGPEP
WCAKVQGRRWHLQLLGEGHSHFQVSLDARTARVWLRTRRPLDREARELYSLRLGLCCKRC
APQGVAPAELAALTVRVLDDNDNAPRFVGPSSAQLRVEETLALKSQVWQARAEDADAGAN
AELRYFALPRSAHFFVVPRSGRVVLVSSLLHLRAPIPLRLYARDRGRPALLSEPLELEVL
PQPKRLPPPPPRRRRAALPPAAPLALALPEDARPGTRLATLAPARFASAWFELLSPPVEE
SPVSVGRESGEVTLRAALDREAVAAWELVVRVQERRGKDWYLVHVSLTVTDVNDNVPEWA
MEPFPFLAVVSPEAAAGTEVYKLLAVDADEGIHGTVEYFLLEGGEDRFEVEKDTGWIRTT
GLPLVRDKEYLLTVLAADKLGSRGSPASVSVIAGFRPPQFTNMSYLVHVPENTPQREPFL
TVTAVSYQKKSLSYSLLTNPGGLFSIDQATGEISLTRSVDYEGDPHQYLLLVRAEEDEEQ
SSTAAEVLVVITDVNDCAPEFHQSIYSKVGVPETVPMTTALLQVTATDCDSKENAQLLYY
TLSQDFSITSHGTIFPATRLDYERPNHLYEFIIMAVDQGEEPRTGTATVRIHVSNVNDEA
PEFSQTVYRSFVSEDAGPNTLIATVNAVDPDGDGVTYDILSGNQKGNFVIDPKKGLLRLR
ASPFPKLQGTEYVLNVTATDDNASGGPHSLTSTAQVVVKIDDVNNNKPVFQKCQYYREHA
SVLENQPSGTVVLQVEATDADEGANGVVKYGLMHRDGVLPAFSIHPDTGVLTTVQVFDRE
KQREYPITVTATDQAAEPLIGICQLNVVILDQNDNDPRFENTHYEYFLREDTRVGTSFLR
VAARDDDYGSNAAITYSIASGEPNYLQINPTTGWVFVNQPISQKSSIIREITATDGGNRS
SKVELAVTVTSAKNQPPQWERDSYEVVIPENTTRDASILTIKATSPLGDPRVTYNLEEGL
VPETNMPVRFYLTPNRHDGSASILVAEPLDYETTKSFLLRVRAQNVAAVPLAAFTTVYVN
VTDVNDNVPFFTSSIYEASVTEGADVGTFVTQVSATDLDLGQHGEITYSLLHDSGRDYAC
FRLDPQTGSIYTTSVFDREEKGSYLLEVKSVDGSESARPGKHGKPNSDTAYVRVSISDVN
DNQPVFAQAVYEVSVDEDQDVGSTILTVSANDEDEGTNAKLRYQITAGNTGGVLDVDPET
GAIFIAQPLDYEETKMYEIHLLASDGKWEDYAVVIISIMNKNDEAPVFSINEYYGSIIEE
LDALPIFVLQVMASDPDSGVDGGDLRYSLHGYGAADIFTIDEKTGSIYSHKRLDREERAL
WRFIVLATDEGGGGLTGFADVIINVWDINDNAPTFTCMPDDCNGNVFENSPADTLVMEMA
AVDRDDPNVGLNAVLTYRITENVKNEFGTDMFNINPNTGTIHVAGGLLDRERTESYFLTV
EARDGGGLTGTATATVWVADVNDNVPKFTKTLWQAAVPENSAIDSEVLQVCATDADIGEN
ANLMFSIVGGDPDEKFYIENDKEWQCGTVRLKKKLDFENARERQFNLTITVEDLDFSSVA
VCLIEVEDSNDHSPAFLSQFIQTNPIFEDVPVGTTVTTVRATDKDSDLNGKIIYSIKSDS
DPMRQFVVDQFGHVVVAKALDREAIQKYALIVQASDQGTPARTGSVTVLINLLDINDNGP
RFEAPYMPVVWENTLKPEIVHMNHTSKLLHAFDPDSEENGPPFTYSLPPDYQNSLDFSLT
DNRNNTATVTALRSFDREKQKVFHLPIVITDSGIPAMSSTTTLSITVGDENDNCHESGHK
EIYVYSYKGKWSTTVLGDVFAPDQDDWDNKTFLSEGKLLKSFRLNQRTGSLLMVDNTPQG
IYNLRVRVSDGVCPDVISTVQIHVRDLENEAIQNSATVRFSDVTAEEFVRRDEHGKTRHG
EFKEFLAKLLPARLSDVIVFSVMSRDGKQTDVRFAVCAGSGYYRPEKLHAEMAAFKTEMQ
LALQLNISQIDVDECRSANCSEGCTNHLVVSDIPTVMDTGSVSLVSLTTSSHAICGCSAR
ERLHQPCSSYPGSPCLNGGVCMDTLNGYRCLCPASFHGPDCQQTKHSFHGNGYAWFRPIR
PCFESSLSLEFITVVPDGLLLYSGPLSNPEPGSTENFIAIELSNGIPVLKMSHGSGSVVL
QFPSHLNVADKKWHRLEVRTNGQDVRFTLDGCGTAVVSEIEGVGRWLSTEDRTSCEVLGS
VPRRARYLNVNHVLQLGGVKESLPYSYPQLLHKHFSGCLRNFILDTQVYDLQSPAESLNS
FPGCTLTDGSCETMGSSSCGIHGRCLGDWGSFACHCLPGYHGYRCDKVAKEYRFEAGSHV
RYQLPVSVSARRTLLQALVRTRQRDSVIATVRSRGRDEHITLQVVQGLLVVSYNLGDGNY
SVSLPSYHIDNGEWHPITLERNENEFTLRLYEGGGKREITKAAGVYKEIVIDPSSLVLGN
TYPFNQNKSFQGCMKDVRFNNYRIPLDTHGKELVSVLSAQGIKEGCSSEACRNNPCNQEF
ICIDLWMMHECSCPAGHLLLENASGRQCVYTACAERPCNYGTCVALSPSAFQCHCPDGYA
GRRCEVTLAIFHRDTGLSFTSLFAICVCFLALLALLSAGLLWAHCRTRKALHGGVYHGAA
HPEELEDVRENILNYNEEGGGEQDEDAYNMAELQVSVQGSPAYSAQRRQAAARRAGAELG
RALPALLREAERRGPGPPHDSLRVFCTEGAGSSAGSLSSLSSLGSAGPGGGSACRDIHEW
GPKFEKLRQLYSRGEAGEL
NT seq
8520 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccgcggagcgcggcgcgctgccggctgcctgctgctgtgctgggctctggcc
gccgcccgcgccgccccgcgcaggacaccctcgttcgacgggcacgtcgcggagaaccgg
ccggcgggcacgcgggtgcgcgggctcagcatccccctgacgcggctggggcccgagccc
tggtgcgccaaggtgcaggggcgccgctggcacctgcagctgctgggcgagggacattcg
cacttccaggtgtcgctggacgcgcgcacggcccgcgtgtggctgcgcacccgccgcccg
ctggaccgcgaggctcgggagctctactcgctccgcctggggctgtgctgcaagcgctgc
gcgccccagggcgtcgcgcccgcggagctggccgcgctcaccgtgcgcgtcctggacgac
aacgacaacgcgccgcgcttcgtgggccccagctccgcgcagctccgcgtggaggagacg
ctggcgctcaagtcccaggtgtggcaggcgcgggccgaggacgcggacgcgggcgccaac
gcggagttgcgctacttcgccctcccgcgcagcgcgcacttcttcgtggtgccgcgcagc
gggcgcgtggtgctggtgagctccctgctccacctgcgcgctcccatcccgctgcgcctc
tacgcgcgggaccgcggccggccggcgctgctcagcgagcccctggagctggaggtgctg
ccgcagcccaagcgcctcccgccgccgccgccccgccgccgccgggccgcgctgccgccc
gccgcgcccctggcgctggccctgcccgaggacgcccgcccgggcacccgcctcgccacc
ctggcccctgcgcgcttcgcctccgcctggttcgagctgctgtcgccgcccgtcgaggag
tcgccggtgagcgtggggcgagagagcggcgaggtgacgctgcgcgctgccctggacagg
gaggcggtggccgcctgggagctcgtcgtccgcgtccaggagcgccgagggaaggattgg
tacttggtgcacgtgtccctgactgtgacagatgtaaatgacaacgtccctgaatgggcc
atggagccctttcccttcctggctgtggtttcccccgaggctgcagcagggactgaagtg
tacaagctgcttgctgtggatgcagatgaagggatccatggaactgtagaatattttctc
ttggaaggtggtgaagacagatttgaagttgagaaggacactggctggattcgaacaaca
ggtttgccattggtgagggacaaggaatatttgctgactgtactggcagcagataaactt
ggaagcagaggatccccagcctctgtgtctgtaattgctggatttcgacctccccagttc
accaacatgtcatacttggtgcatgttcctgagaacaccccgcaaagagaaccctttctt
acagtcactgctgtgtcatatcaaaagaaatccctgagctacagtttgctcactaatcct
gggggtctgttcagcattgatcaggcaacaggagagatcagtctgactcggagtgtggat
tatgaaggtgacccccaccagtacctgctcttggtcagggcagaggaggatgaggagcag
tccagcactgctgctgaggttttggttgtaatcacagatgtgaatgattgtgctcccgaa
tttcatcagtcgatttacagcaaagtcggtgttcctgagacagttcctatgacaactgca
cttctccaagtgacagccactgactgtgattcaaaggagaatgcccagttgctgtattac
actctgagccaagacttcagcattacttctcatggcactatttttccagcaacacggctg
gactatgagcgccccaaccacctctatgagttcatcatcatggctgtagatcaaggggaa
gagcccaggactgggacagcaactgtgaggatccatgtctccaatgtgaatgatgaggca
cctgagttttctcagacagtctacaggagctttgtttctgaagatgcaggcccaaacacg
ctgattgccacagttaatgctgttgatcctgatggagatggtgtcacatatgatattctg
tctgggaatcagaaagggaactttgttattgaccctaagaaagggctgcttagactccgt
gcaagcccctttcctaagctgcaggggacagaatatgttctgaatgtcacagctactgat
gataacgcctctggagggccccactctctcacgagtactgcccaggttgttgtgaaaatt
gatgatgtcaacaataacaaacctgtctttcagaagtgccagtactatcgggaacatgcc
tctgtcctggaaaatcagccttcagggactgttgttctgcaggttgaagccactgatgct
gatgaaggggccaatggtgtagtgaaatatggcttgatgcacagagatggagtcctacca
gcatttagcattcatcctgacacaggagttctgacaactgttcaggtatttgatcgagaa
aagcagagggaatatcccatcactgtgacagcaacagatcaggcagcggagccactcatt
gggatatgtcagctcaatgttgtcatcctggaccaaaatgacaatgaccccagatttgaa
aacacccactatgaatatttcctcagagaggacacaagagttgggaccagcttcctgcgt
gttgcagcccgtgatgatgactacggctcaaatgctgccattacatattccatagcaagt
ggtgaaccaaattatttacagattaatcctaccacaggctgggtgtttgtgaaccagccc
atatctcagaagtcatctataattcgagagattactgctacagatggaggcaacaggagc
agtaaagttgaacttgctgtaactgtaacaagtgcaaaaaaccagcctccacaatgggaa
agagacagctatgaagttgttattccagagaacacgacacgggatgcctcaattttgaca
atcaaagcaacttctccccttggagatccccgtgtcacttacaacctggaagaggggctt
gtcccagagaccaacatgccagttcgtttctacctgactccaaacagacatgatggttct
gcttcaatcttggtagctgagccactggattatgaaacaacaaagagctttctgctgcga
gtgcgagcacagaacgtggctgcagttcctctggcagcattcaccacggtctatgttaat
gtcacagatgtcaatgataatgtcccattcttcacttcatccatttatgaagcctcagta
acagagggagctgatgtggggacatttgtcactcaggtgtctgccaccgaccttgacctt
ggtcagcatggtgagataacttactccctgttacatgacagtggcagagactacgcctgt
ttccgcttggacccgcagacaggctccatttacaccacctcagtgtttgacagggaggag
aagggctcctacctgctggaagtcaagtcagtggatggctctgaatcagctcgacctgga
aagcatgggaagcccaactctgacacagcctacgtgcgtgtgtccatcagcgacgtcaac
gacaaccagcccgtcttcgcccaggccgtctacgaggtgagcgtggacgaggaccaggat
gtgggctccaccatcctcactgtcagtgctaacgatgaggatgaaggaacaaatgctaaa
ctacggtatcagatcacagctgggaacacagggggagtgctggatgtggatccagaaaca
ggagccattttcattgcccaaccactggactatgaagaaacaaaaatgtatgagatccac
ttgttggcctctgatgggaaatgggaagattatgcagttgtcatcatcagcattatgaat
aaaaatgatgaggctccagttttttctatcaacgaatactatggaagtataattgaggaa
ctggatgccttaccaatctttgtacttcaggttatggccagtgatcctgatagtggtgtt
gatggaggagatttgagatactccttgcatgggtatggtgcagctgatattttcacaata
gatgagaagacaggcagcatttactcacacaagaggctggaccgggaagagagggcactg
tggagattcattgtgttggctactgatgaaggtggaggaggtctgacagggtttgctgat
gtgatcatcaatgtgtgggatataaatgacaatgcacccacgttcacgtgcatgcctgat
gactgcaatgggaatgtctttgaaaactctcctgcagacaccttggtcatggaaatggct
gcagttgatcgtgatgatcccaacgtcggtctgaatgctgtcctgacctacaggataacc
gagaatgtgaagaacgagtttggtactgacatgtttaacatcaatcccaatactgggacc
atccacgtggcagggggactgctggacagggagaggactgaaagttattttctcactgtt
gaagcaagagatggaggagggctaacaggaactgccactgccactgtctgggttgcagac
gtcaatgacaacgttccgaaattcaccaagacgctgtggcaggcagcagttcctgagaac
agtgccattgactcagaagtcctgcaagtgtgtgctacggatgcagacattggggagaat
gcaaacttaatgttcagtatcgttgggggagacccagatgagaagttttatattgagaat
gacaaagagtggcaatgtggcactgttcggctgaagaaaaagttggattttgagaatgcc
cgtgaaagacagtttaatcttactattactgtggaagatctggatttttctagtgttgca
gtgtgcctgattgaagttgaagactcaaatgaccacagcccagcttttctctctcagttt
attcagacaaaccctatatttgaagacgtgcctgtaggtactacagtaaccacagtgagg
gctacagacaaggactctgatttgaatgggaagattatctattctataaagtcagattca
gatcccatgagacagtttgtggttgaccagtttggccacgtggttgtggcaaaagcgctc
gatcgtgaagcaattcagaaatatgctttaattgtacaagcttcagatcaggggacacct
gcccgcactgggagcgttacagttttaattaacttgcttgatattaatgacaatggaccg
aggtttgaggcaccatacatgcctgtagtttgggaaaacacactgaagcctgaaatagtg
catatgaaccatacatcaaagctgcttcatgcgtttgatccagacagtgaggaaaatggg
ccaccctttacctattcattgccaccagattatcagaattccttggatttttctcttact
gacaacagaaataacacagccactgtaacagctttgaggtcctttgacagagaaaagcag
aaggtgtttcacctgccaatagttataacagacagtgggattccagctatgagctccaca
accaccctgagtataacagttggagatgagaatgacaactgccacgagtctgggcacaag
gagatctatgtgtacagctacaaaggaaaatggtcaacaacagtgcttggggatgtgttt
gcaccagatcaggatgactgggacaataaaacatttctctctgaaggaaaactgctcaaa
tctttcagattaaatcagaggactgggtctttgctgatggtggataacactcctcaggga
atatacaacttaagagttagagtttctgatggagtttgtcctgatgttatatctacagta
caaatccatgtcagagacctggaaaatgaagccatacaaaactcagccactgtgcgtttc
tcagatgtgacagcagaggagttcgtaaggagagatgaacatggcaaaacgagacatggc
gagttcaaggagttccttgcaaaattgctacctgcaaggctgagtgatgtgattgtcttc
agtgtgatgagcagggatggaaagcagacagatgtgagatttgcagtctgtgctggctcg
ggctattacagacctgagaagctgcatgcggagatggcagcgtttaaaactgagatgcag
ttagctctacaactgaacatttctcaaatcgatgttgacgagtgcaggagtgccaactgc
agtgagggctgtacaaaccacctcgttgtgagtgacatccccacagtgatggacactggc
agtgtgtccttggtgtccctcaccacctccagccacgccatctgcggctgctccgcccgc
gagcgcctgcaccagccctgctcctcctaccctgggagcccctgcctcaacgggggggtt
tgtatggacactctgaatggctacagatgtctttgtcctgcttcttttcatggaccagac
tgccagcagactaagcacagtttccatggaaatggttatgcatggtttcgtcccatcaga
ccttgttttgaaagctctctctctctagagtttattactgtggttccagatggactttta
ctatatagtggccctttatcaaatccagaacctgggagtacagaaaacttcattgcaata
gaactctccaatggtattcctgtgctgaagatgagccatggttcaggttctgtggtgctg
cagtttccaagtcatctgaatgtagcagacaagaagtggcatcgacttgaagtcagaacc
aatggtcaggacgtgcgcttcactctggatgggtgcggcacggccgtggtgtccgagata
gaaggggtcggccggtggctctccactgaagaccgcacgagttgtgaagtcttgggctct
gttccacggagagcaaggtatttgaatgtgaaccatgttctccagctgggtggcgtgaaa
gagtcgttaccatattcctacccacaattgctgcacaaacatttttctggatgcttgcgc
aatttcatcttggatactcaggtgtacgaccttcagtctcctgcagagtccctgaacagc
ttccctggctgcaccctgacggatgggagctgtgagaccatgggctcctcctcctgtggt
atccatgggaggtgcctgggggactggggctcctttgcgtgtcactgtttgccaggctac
cacggctatcgctgtgacaaagtggccaaggagtacaggtttgaggcaggcagccacgtg
cggtaccagctgcccgtcagcgtgtcggcccgcaggacgctgctgcaggcgctggtgcgc
acacggcagcgcgacagcgtcatcgccaccgtgcgctcccggggcagggacgagcacatc
accctgcaggttgttcagggactcttagtggtctcatacaatttgggtgatggaaactat
tctgtaagccttccctcctaccacattgataatggtgaatggcatcccatcacactggag
agaaatgaaaatgaatttactcttcgcctttatgaaggaggtgggaagagagagattact
aaagcagcaggagtctacaaagagattgtcattgaccccagcagcttggtcctcggaaac
acctacccattcaatcaaaacaagagttttcaaggatgcatgaaggatgtcagatttaac
aactacagaatccctctggacactcatggaaaggagctggtgtcagtattgagtgcccag
ggcatcaaagaaggctgttcttccgaggcctgtcggaataacccttgcaaccaggaattt
atttgtattgatttgtggatgatgcatgaatgcagctgccctgcaggacacctgctgctg
gagaacgcctcgggccggcagtgcgtgtacacggcgtgcgccgagcggccctgcaactac
ggcacctgcgtggccctgtcccccagcgccttccagtgccactgccccgacggctacgcc
gggcgccgctgcgaggtcaccctggccatcttccacagggacacgggcctcagcttcacc
tccctcttcgccatctgcgtctgcttcctggcactcctagctctgctcagcgccggcctg
ctctgggctcactgcaggacacgcaaggctctgcacggaggcgtttaccacggagctgct
catcccgaggagctggaggacgtcagggaaaacatcctcaactacaacgaagaagggggt
ggggagcaagatgaagacgcctacaacatggcagagctgcaggtgtccgtgcagggcagc
ccggcgtactccgcgcagcggcggcaggcggcggcgcggcgggcgggcgcggagctgggc
cgggcgctgcccgcgctgctccgggaggccgagcgccgcggcccggggccgccgcacgac
tcgctgcgcgtcttctgcaccgagggcgcgggctccagcgccggctccctcagctcgctc
agctcgctcggctccgcggggccgggcggcggcagcgcctgccgggacatccacgagtgg
ggacccaagttcgagaagctgcggcagctgtactcgcgcggagaagcaggagagctgtag
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