Sylvia atricapilla (blackcap): 136366739
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Entry
136366739 CDS
T10263
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecules
sati04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
136366739 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
136366739 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136366739 (CDH5)
04090 CD molecules [BR:
sati04090
]
136366739 (CDH5)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Major cadherins
136366739 (CDH5)
CD molecules [BR:
sati04090
]
Proteins
136366739 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
136366739
NCBI-ProteinID:
XP_066184114
LinkDB
All DBs
Position
12:complement(20886780..20915564)
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AA seq
772 aa
AA seq
DB search
MSHLILLFSLFLALEFADGKSQKSTQNLCSNYVSHKRQKRDWIWNQMHIKEEIDTPLPHH
VGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTN
NRSLERPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHA
TVTYEVTTGGEYFTIDDSGVIYTKEPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIIT
LSDINDNFPVFKHTSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFD
IEANPYTNEGIIRPKKPLDFETVSEYKFGIEATDPTVNLRHFKPGNPRSISTVTIQVTDV
DEPPVFTKLPYEFKVRENHAEVKTLGSVHAEDPDAAKRKIRYIQRRASPNGDYVRVSNNG
VIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEP
RVCENAVPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLIENYDNTANITVRYGQFN
RELVKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGNFTFCEERAKQVGVSIQALVAI
FICIFTIIVIVLLILLRKRHKKDLSGLGRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGLKAEAAPCPYAQVQKPPGNVTPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccttattctacttttctcgttgttcttggctctagaatttgctgatggaaaa
agtcagaaatcaacccaaaacctttgttcaaattatgtcagccacaaacgccagaagaga
gactggatctggaaccaaatgcacatcaaagaagagattgatacacctttaccacaccat
gttggcaagatcacatccagtgtaaggaacaacaacgccaagtacatcatcgagggggaa
tatgccaacaccatcttcaaggtggaggagaccagtggggatgtgtacgccttcgagagg
ctggacagggagaagaaggcagagtatgaactgacagccctcatcattgacagaaccaac
aacaggtccctggaacgcccctccaaattcatcatcaaggtgtatgacatcaacgacaac
gcccctgtgtttgtgcagaaggtgttcaatggctctgtcccagaaatgtccccagtagga
acctcagtcaccaaagtgacagctgtggatgctgatgaccccacagtgtcaggtcatgcc
acggtgacctacgaagtcaccacaggaggtgaatatttcaccattgatgactctggtgtg
atttatacaaaagagcctaatttggacagagagaccaagtcaacatatgagattgttgtt
caagccaaagatgctccgggtttctctggggattccagcacagccacagtgatcatcacc
ttgtctgacatcaacgacaacttcccagtgttcaaacacacatcatttcactttaaagtt
cctgaaaacatctcagtaggaggagaagttggcagagtcaaagtagaagatattgatgaa
ccacagcacagaaacacaagatacagctttatccaaggagagttcagggacaccttcgac
attgaggcaaatccgtacacaaatgaaggcatcattaggccaaagaagcccctggacttc
gaaacagtatcagaatacaagtttggcattgaagccacagaccccacggtgaaccttcgg
catttcaaacccggcaacccccggagcatctcaacagtcaccatccaggtcaccgacgtg
gatgagcctcccgtcttcaccaaactcccatatgaatttaaagtgagggaaaatcatgca
gaagtaaaaacacttggttcagttcatgcagaggaccccgacgcagccaaacggaaaatc
agatatattcagcgtagagcaagtcctaatggagactatgtcagagtatccaataatgga
gttattcaacttcccaagcctctggacagagaattcagctcatcatacaacatcactgtg
gcagctgtggagatccttgaagatggccgtctttccgacagagagtcacatgcccatgtc
cacgtcatagtggatgatgtcaatgataatgctccagaacttgtttctcctgaggaaccc
cgagtgtgtgaaaatgctgtccctggaaaggtgatcgtcaggatttcagctgttgacaag
gatgaaacatctcccagaggctttttcagatactcactggccacagaagacagcaacttc
tccctgatagagaactacgacaacaccgccaacattactgtcagatacggccagttcaac
cgggaactggtcaagttccactacctacctgtcctcatctcagacaacggcgaccctgac
ctcaccagcacaaacaccctggtcatcagtgtctgcaagtgcaacgagaaaggaaacttc
accttctgtgaggagagagcaaagcaggttggcgtcagcatacaagcattggtggcgatt
tttatttgcatcttcacaatcattgtgattgtgttgctgattctgctgagaaagaggcac
aagaaggatctgagtgggctggggaggaatgtggcagagatccacgagcagctggtcacc
tatgacgaggagggaggaggggagatggacaccaccagttacgacgtgtccgtgctcaac
tccgtccgcaagaacggcctcaaggcggaagctgctccctgtccgtatgcacaggtccag
aaacctcctgggaacgtcacccctggagctggggggatggagatgatgattgaggtgaag
aaggacgaggctgacaacgacagggatttgctgccctacgacaccctgcacatctacggc
tacgaaggcgccgagtccatcgcggagtccctcagctctctgggctcaggctcctcagac
tcagacattgattatgactttctcaatgactggggacccaggttcaagatgttagctgag
ctgtatggatcagaaccaagtgaagattttgtgtattaa
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