Sylvia atricapilla (blackcap): 136366740
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Entry
136366740 CDS
T10263
Symbol
CDH11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136366740 (CDH11)
Cell adhesion molecules [BR:
sati04515
]
Cadherins
Major cadherins
136366740 (CDH11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
136366740
NCBI-ProteinID:
XP_066184115
LinkDB
All DBs
Position
12:21607299..21648953
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AA seq
792 aa
AA seq
DB search
MKEDHCLHAALLCLGVLCCSQALSTERLHHSRPSLHGHREKGKEGQVLHRSKRGWVWNQF
FVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREE
RAQYTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQ
VTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD
MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN
GLVAYSIIDGDGMDLFEITTDYETQEGVVKLKKTLDYETKKSYSLKVEAANVHIDPKFIS
NGPFKDTVTVKIAVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRYS
IDRHTDLERYFVINAEDGNIKTIKALDREEMAWHNISVFAVEVHKQHQEAKVPIAIKVVD
VNDNAPKFAAAYEAFVCENARSNQQFITISADDKDDSANGPRFIFSLPPEIIHNPNFTLR
DNRDNTASVLVRREGFSRQKQDLYLLPIVISDGGMPPLSSTNTLTIRVCGCDSGGSLLSC
NAEAYVLNAGLSTGALIAILACIVILLVIVVLFVTLKRQKKEPLIVFEEEDVRENIITYD
DEGGGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYLPRPGLRPAPSSVDVDDFINTR
IQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFKKLAD
LYGSKDTFDDDS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaccattgtttacacgctgctctcctctgcctgggggtcctgtgctgcagc
caggccctgagcacggagaggctccaccactcccggccctcgctgcatgggcaccgtgag
aagggcaaggagggacaagtcctgcaccgttccaaaagaggctgggtgtggaaccagttc
tttgttatagaggagtacacgggaccagatcctgtgctcgtaggaaggcttcattcagat
attgattctggagatggaaacattaaatacattctctcaggtgaaggagcaggaattatt
tttgttattgatgacaaatcagggaacatccatgcaaccaagacactggatcgggaggag
agagctcagtacaccctgacagctcaggctgtggacaggaacacaaacagacctttggaa
cccccttctgaattcattgtcaaagttcaagacataaatgacaacccacctgagtttctc
catgaaaattaccatgccaatgtgcccgagagatcaaatgtaggtacatcagttattcag
gtaacagcttcagatgctgatgaccctacctatgggaacagtgccaaattggtttacagt
atccttgaaggtcagccctacttctcggtggaggctcaaacaggaatcatccgaactgcc
cttcccaacatggacagagaggccaaggaggagtaccatgtggtgatccaggccaaggac
atgggaggacacatgggaggcctctcagggacaaccaaagtgacaattacacttacagat
gtcaatgacaacccaccaaagttcccacagagtgtgtaccagatgtcggtgtcggaagca
gctgtcccaggagaggaagtggggagagtgaaggccaaagatcctgacattggagagaat
ggcttagtggcttacagcatcattgatggagatggcatggacttatttgaaatcaccaca
gattatgagactcaggaaggagttgtgaagcttaagaagaccttagattatgaaaccaaa
aagtcctacagcctgaaggtcgaggcagccaatgtccacattgaccccaagttcattagc
aacgggcccttcaaggacacggtgacagtgaaaatagcagtggaagatgctgatgagcca
ccggtgtttttgaagccaagttacatttttgaagtacaggaaaatgcagcctctggtact
gtggttggaaaagtacatgccaaagacccagatgctgccaacagtgctataagatattca
attgatcgacataccgaccttgaaagatattttgttattaatgcagaagatggcaatatc
aagacaataaaggctttggatagggaagaaatggcttggcataatatctctgtctttgca
gttgaagtccacaaacagcaccaggaagccaaagttcccattgcaatcaaggtcgttgac
gtcaatgacaatgctcccaagtttgccgcagcctacgaagcctttgtgtgtgagaatgcc
cgaagcaaccagcaatttattacaattagtgctgatgacaaggatgactcagccaatgga
ccaagatttatcttcagtttaccacctgaaattattcataatccaaattttacactcaga
gacaacagagataacaccgcgagcgtgctggtcagacgggaagggttcagtcgccagaag
caggatttgtacctgctgcccatcgtgatcagtgacggcggcatgcccccactgagcagc
accaacacgctgaccatccgcgtctgtggctgcgacagcggcggctccctgctctcctgc
aacgctgaggcttacgtcctcaacgccgggctcagcaccggcgccctcatcgccatcctg
gcctgcatcgtcatcctcttagtgattgtggtgctgtttgtaaccctgaagaggcagaag
aaagagcccctgattgtgtttgaggaggaagacgtgcgggaaaacatcatcacatacgat
gacgagggcgggggcgaggaggacacggaggcgttcgacatcgccacgctgcagaacccc
gacggcatcaacggcttcatcccccgcaaggacatcaagcccgagtaccagtacctgccc
aggccggggctgcggcccgcgcccagcagcgtggacgtggatgatttcatcaacaccagg
atacaggaggctgacaacgaccccactgcccctccctatgactccatccagatctatggc
tacgagggcaggggctccgtggccgggtccctcagctccttggagtcagcgacaacagat
tctgacttggactatgactatctacaaaactggggacctcgatttaagaaacttgcagac
ttgtatggctccaaagacactttcgatgatgattcttaa
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